Sinocyclocheilus grahami (golden-line barbel): 107603288
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Entry
107603288 CDS
T04918
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgh03009
]
107603288
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107603288
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
90S particles
Helicases
107603288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
CTE_SPB4
DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
107603288
NCBI-ProteinID:
XP_016151535
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MAVLDEADRILDMGFADTLNAIIENLPKTRQTLLFSATQTKSVKDLARLSLKNPEYVWVH
EQAKFSTPATLEQNYMVCELHQKVNMLFSFLRSHLKKKIIVFFACCKEVQYLFRVFCRLR
PGISVLALHGKQQQMKRVEVYNDFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDAN
TYIHRVGRTARYKEGGEALLVLLASEEKGMIAQLQKKKVPINKIEVNPEKLVFVQQKLEA
FLAQEKEQKERAQRCFVSYLRSIYLMKNKDVFDVFQLKLPEYAMSLGLAVAPRVRFLNKA
QQQKSGVTQDNSGAAGHQSEDELKSFKAQLKGEQSQSSQSEEEEDENDEDENKDEETLKP
AALLCGFNEEDEDDQKDQDLLTVKRKDVFNISEESQDDEGTDAKAKNQKQKESKFKDAKK
IQKKNFRVNTKKIFTEEGEVVQQWPPLQKTMVLDEEEEETSGINMEAAKERLRKEDQEFD
KIEYRRKIKEKHREKRLKEKAARREASKQHKEEKKKGDDDDDDDEEEAVAYLSGADEEFD
PSTLPDPDKVRNSESSEEEEWLVFGTGARGFTNHELFPVAVPVFLLCCLDRYLPPINLIG
SYWPCLTSAPASALCQE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacttgatgaagccgacagaattctggacatgggtttcgccgacacgctcaat
gccattattgaaaaccttccgaaaacacggcagacccttctcttctctgccactcaaacc
aagtctgtcaaagatctggccagactgagcctgaagaacccagagtatgtgtgggtccat
gagcaggccaagttcagtacaccagccactctggaacagaactatatggtgtgtgagctg
caccagaaagtcaacatgctcttctcgtttttgaggagtcatcttaagaagaagatcatt
gtcttttttgcctgctgcaaagaggttcagtatctgttccgggtcttctgccggttgcgt
ccgggtatctccgtacttgctttgcatggcaaacagcagcagatgaagagggtggaggtt
tataatgactttgtccgcaagacctcagccgtcctctttgccacagacatcgctgccaga
ggacttgacttccctgcagtgaactgggtgctgcagtttgactgtcctgaagatgcaaac
acatacatccacagagttggcagaacagccaggtataaggagggaggcgaagctctcctt
gtcctattggcctcagaggagaagggcatgattgcacagcttcaaaagaagaaagttccc
attaacaaaatcgaggtgaacccagagaagttggtgttcgtccagcagaagttggaggcc
ttcctggcacaggagaaggagcagaaggaacgagcacagaggtgttttgtgtcctacctc
cgctccatctatctgatgaagaacaaagacgtctttgatgttttccagctcaaactccca
gaatatgccatgtcactgggtttggcggtggctccgcgggtccgtttcctcaataaggcc
cagcagcagaagagtggagtgacgcaggacaacagcggcgctgcaggacaccagtctgaa
gatgagctgaagagtttcaaagcccaactcaaaggagagcagtctcagtcctcacagtct
gaggaagaagaggatgagaatgatgaggatgagaataaggatgaggagacattaaagcct
gcagctctgctatgtggctttaatgaagaggatgaggatgaccagaaagatcaggaccta
ctgactgtcaagcgtaaagatgtgttcaatatcagtgaagagagccaggatgatgagggc
acagatgctaaggccaagaatcagaaacaaaaggaatccaaattcaaagatgcaaagaaa
atacagaaaaagaacttcagggtcaacactaagaagatcttcactgaggagggagaggtg
gtgcagcagtggcctccattgcaaaagaccatggtactagatgaagaggaggaggaaacg
tctggcattaacatggaagcagccaaagagcggcttcgcaaggaagaccaggagttcgac
aagatcgagtaccgtcgtaaaatcaaggagaaacatagggagaaaagactgaaggagaaa
gcagctcggagggaagcgagcaaacagcataaagaggagaagaagaaaggtgatgatgac
gacgatgatgatgaggaggaggcggtagcgtatctgtcaggtgccgatgaagaatttgac
cccagcacacttcctgaccccgacaaagtgcgcaactctgagtcctctgaggaggaagaa
tggctggtgttcgggactggagccagaggcttcactaaccatgagctctttcctgttgcg
gtaccggtcttcctgctttgctgtcttgacagatacctccctcccataaatctaattgga
tcttattggccctgcctcacctctgcccctgccagcgctttgtgtcaagaatag
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