Sphingopyxis granuli: SGRAN_0016
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Entry
SGRAN_0016 CDS
T04372
Name
(GenBank) Transcriptional regulator, LuxR family
KO
K19731
LuxR family transcriptional regulator, quorum-sensing system regulator CciR
Organism
sgi
Sphingopyxis granuli
Pathway
sgi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SGRAN_0016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgi03000
]
SGRAN_0016
Transcription factors [BR:
sgi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SGRAN_0016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AMG72414
UniProt:
A0AA86KZX3
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Position
complement(17136..17993)
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AA seq
285 aa
AA seq
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MSHLSSVPERNRDRRPRERLAGSTGWERAGDRTVTVKHFCLMEELALEISTATNEDGLFE
ALARASMRLGFDHFALAYDRRGNAEPASLLVHNYPDAWAKVYVGFDLGGADPVRRAGERS
MTGFRWDEIESYIPLTRSDRQMLHVGREYGLADGYTVPRHLPGEASGACSFVLRPQSELQ
DDMLRIAEIIGALAIVSARQLVGAVPLKSKATLSERQRECVLWTARGKTAAEVAVILGIG
EVTVVQHLKTARDRYDVHCGQMLTLCALFDGLIGFGDVYDWWHAR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatctgtcgtccgtgccggagaggaaccgggaccggcgacccagggagcggctc
gcgggatcgacgggttgggaacgtgccggcgaccggacggtcacagtgaagcatttttgt
ttgatggaggaactcgccctcgaaatttccacggcgacgaatgaggacgggctcttcgaa
gccctcgcgcgcgcatcgatgcgcctcggcttcgaccatttcgcgctcgcctatgaccgg
cgcggcaatgccgagccggcatccctgctggttcacaattaccccgatgcctgggccaag
gtctatgtcggtttcgatcttggcggtgccgatccggtgcgccgcgccggcgaacggtcg
atgaccggcttccgctgggacgagatcgaaagctacatcccgctgacccgcagcgaccgg
caaatgctccatgtcggccgcgaatatggtctcgccgacggctatacggtgccgcgccac
ctccctggcgaggccagcggcgcctgctctttcgtcctgcgcccgcaaagcgagcttcag
gacgatatgctccgcattgccgaaatcatcggcgcgctcgcgatcgtctcggcacgccag
ctcgtcggcgccgtgccgctaaaaagcaaagcgacgctgagcgaacggcagcgcgagtgc
gtattatggaccgcacgcggcaagaccgcggccgaagtggcggtcattctcgggatcggc
gaagtgacggtcgtccagcatctcaagaccgcgcgcgaccgctatgacgtgcattgcggc
cagatgctgaccctctgcgcgctgttcgatggcctcatcggattcggggacgtctatgac
tggtggcacgcgcgctga
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