Sphingopyxis granuli: SGRAN_0107
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Entry
SGRAN_0107 CDS
T04372
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgi02000
]
SGRAN_0107
Transporters [BR:
sgi02000
]
Other transporters
Pores ion channels [TC:
1
]
SGRAN_0107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF2341
Motif
Other DBs
NCBI-ProteinID:
AMG72505
UniProt:
A0AA86L284
LinkDB
All DBs
Position
complement(113005..116103)
Genome browser
AA seq
1032 aa
AA seq
DB search
MTNSTYFSYRKQILAAASLIGMIVAQNATAQEQATRTEAATEPQTAPRGEEIVVTGSRIA
GTKITEALPVTVVGQDEIAATAAVSGDELLRSIPQMSDQSFNSSNGQTSSNFARGDVGSI
DLRGLGVGNTLVLLNGRRLVQHPSSQASTSLAPVITYNSNSIPVFGIQRLEVLRDGAAAL
YGTDAVAGVVNTILRDNVNGGGVSLQYGGAEGTGLREFNGSGYLGTDFAENRGNISLLFN
YTNRSALTSQDQDFTATGDHRFFDDFTGTVFEGSNSLDDTSTLSQWGNFTTGGIRVRRGT
TNITSAGGVFSIQPTANGGCSADLGGGICIDDATRATTGADRNTRWDSQKNFPQSIIPRL
DRINVFANGHYDLTDNLTLFGEAGYYYAKTRSIQDSVFSIGSIQMTVPASNYWNPFGPVT
FANGMANPNRLAGIDAPAAGLPVTMTSYRFVDLGPTVVDVTNRQFRALLGLRGEALGFNW
ETAALYSQATVRDVQDGISATLLQQNLALSTPDAYNPFSGGNPDDPTGLPISAGNLAAGE
DFRIKTVRRGKSTLAQWDLRASKADLLTLPAGDVGMAIGAELRRDSYLDDRDERVDGTMT
WTDSVTGFEQPSDLFGVSPTPDTKGSRTVFAAYAELAVPLIAPEMNIPLVRSFELQLAGR
YEHYSDFGSIAKPKIAGAWDLFDGWRIRGSWAQGFRAPNLEQTKATIITRGNTRRDYIRC
EADLRAGRIATFDDCSQSFVTTGRRAGNPDLKPETSTTWTIGTVLQPPAFNTGRLRTTFT
LDYWQVKQKGIVGVFGEGNALIADYLARVQGSSDPTVFRLAPTADDVALFAGTGIDPVGR
VQYVDDQYRNLEPQTVRGIDFGLNIGLRDTGIGDFTFAANAAYLLKYFRDVSPDIQILLD
ARAAGDINIDTVIPEGGDQIRRDQFPKWRGSGSLTWKLGQFTAGGFVNYTGSVIDNDISI
NGENLLIKAYTTASLYVQYDLKGGFTDGTQLRVGVRNITNAQPPIDSSSFGYMGSLHSPI
PRYWYVNVRKTF
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacagcacatattttagctaccggaagcaaattctcgccgccgcatcgttgatt
ggaatgatcgttgcgcaaaacgcgacggcgcaggaacaggctacgcgaactgaagctgcg
accgaaccgcaaacggccccgcgcggtgaggaaatcgtcgtcactggcagccgtatagca
gggaccaagattaccgaagcccttccggtcacggtcgttggccaagacgagatagcggcc
acggcagccgtttcgggcgatgagctacttcgctcaatccctcagatgagcgaccagtcg
ttcaatagcagcaacggccagacgagcagcaatttcgcacgcggagacgtcggttcgatc
gatctgcgcggactcggtgtcggcaacacgctcgtcttgctcaacggacgccgcctcgtc
caacatccgagcagccaggcgagcacgtcactcgcgccggtcattacctataatagtaac
tcgatcccggtattcggcatccaacgcttggaagtactgcgcgatggcgccgcggcgcta
tacggcaccgacgccgttgcgggcgtcgtcaacacgattctacgtgataacgtcaacggc
ggcggggtatcgctgcaatatggcggcgccgagggaacggggctacgcgaattcaacggc
tcgggttacctcggcaccgacttcgccgagaatcgcggcaatatctcgctgctgttcaac
tatacgaaccgctccgcactgacctcgcaggaccaagatttcactgccacgggggatcac
cgcttcttcgacgattttaccggtaccgtcttcgagggatcgaatagccttgatgacacc
agcacgctttcgcaatggggcaacttcacgaccggcggcatccgcgtgcgccgcggaacg
accaacatcacaagcgccggcggcgtgttttcgatccagccgacggcgaacggcggctgc
tcggccgatcttggcggcgggatctgtatcgacgacgcgacacgcgccacgaccggtgcc
gaccgcaacactcgttgggattcgcagaagaatttcccccagtcgatcattccccggctc
gaccggatcaatgtgttcgcgaacggccactacgacctgaccgacaatctgacacttttc
ggcgaagctggctattattacgccaagacgcgaagcatccaggatagtgttttctcgatc
ggctcaatccagatgacagttcctgcatccaactattggaaccccttcggccccgttacc
ttcgccaatggcatggcgaacccgaaccgccttgcagggatcgacgcgcccgccgcgggc
ctcccggttacgatgaccagctatcgtttcgtcgatctcggacccacggtggtcgatgtc
accaaccgacagtttcgcgctttgctcggcctgcgcggcgaggcgctcggcttcaactgg
gaaaccgctgccctttattcacaggcgacggtacgcgacgtccaagatgggatcagcgcc
actttgctccagcagaatctcgcgttatcgacgcctgatgcctataatccctttagcggc
ggcaatcccgacgatcctaccggcctaccgatttcggccggcaatctcgccgcgggcgag
gatttccggatcaagactgtccggcgcgggaaatcgaccttggcgcaatgggatctccgc
gcttcgaaagccgacctgctgacgcttcccgctggcgatgtcggcatggccatcggcgcc
gagttgcgacgcgattcctatctggacgatcgcgacgagcgagttgacgggacgatgacc
tggaccgacagcgtcaccggcttcgaacagcccagcgacctttttggggtgagcccaacc
cccgacaccaaggggtcgcgcacggtctttgcagcctacgccgaacttgcggttccgctg
atcgcgcccgaaatgaatataccattggttcgcagcttcgaactgcaactggcgggacgg
tacgagcattattccgacttcggcagcatcgccaagccgaagattgccggcgcatgggac
ctgttcgatgggtggcgcatccgcggttcgtgggcgcagggcttccgcgcgcctaatctc
gaacaaaccaaggccaccatcatcacgcgcggcaacacgagaagagattatatccggtgc
gaggctgatttgcgcgctggacgaatagccaccttcgacgattgctcgcagagtttcgtg
accaccggtcgacgggcgggcaaccccgacctcaaaccggaaacctcgaccacgtggacg
atcgggaccgtacttcaaccgcccgccttcaatacgggccggctgcggacgacctttacc
cttgactattggcaggtgaagcagaagggcatcgtcggcgtgttcggcgagggcaatgcg
ctgatcgcggattatctggcccgcgtacaggggtcgagcgaccccacggttttccgtctt
gcgcccaccgcggacgacgtcgctcttttcgctggcaccggcatcgatccggtgggccgg
gtgcaatatgtcgatgaccaatatcgtaacctcgaaccgcagaccgttcgcggcatcgat
ttcggactcaatatcgggctgcgcgatacgggcatcggcgacttcacgttcgccgccaat
gccgcctatctgttgaaatatttccgcgacgtttctcccgacatccagatattgctcgac
gcgcgggcggccggcgacatcaatatcgatacggtcatcccggagggtggcgatcaaatt
cgtcgagaccaattcccgaaatggcgcggttcgggctcgcttacctggaagctcggacag
ttcaccgcaggcggcttcgtgaattatacgggcagcgtcatcgacaatgacatctccatc
aacggcgagaatctgctgataaaggcttacaccaccgccagcctttatgtgcagtacgat
ctcaagggtggtttcaccgacggcacccaactccgcgtcggcgtccgcaatatcaccaat
gcgcagccgcccatcgattcgagttcctttggatatatgggttcgctccattcgccgatc
ccgcgctactggtatgtcaacgtccgcaagaccttctga
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