Sphingopyxis granuli: SGRAN_0279
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Entry
SGRAN_0279 CDS
T04372
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03030
DNA replication
sgi03430
Mismatch repair
sgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGRAN_0279 (dnaQ)
03430 Mismatch repair
SGRAN_0279 (dnaQ)
03440 Homologous recombination
SGRAN_0279 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgi03032
]
SGRAN_0279 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_0279 (dnaQ)
Enzymes [BR:
sgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGRAN_0279 (dnaQ)
DNA replication proteins [BR:
sgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGRAN_0279 (dnaQ)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGRAN_0279 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF3131
Motif
Other DBs
NCBI-ProteinID:
AMG72676
UniProt:
A0AA86GHS0
LinkDB
All DBs
Position
302786..303478
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AA seq
230 aa
AA seq
DB search
MREIIFDTETTGLDPRSGHRLVEIGCIELVDRRESGRTFHAYFHPERDMPPEAEAVHGLS
IQFLSDKPLFAERADELLEFLGDAPMIAHNAVFDFGFINAELERVGRPALDLARMCCTVQ
MARKLHPGAKHSLDALCTRYGIDRSHRIKHGALLDAELLAHLYIEMTGGRQIGLGLGAES
AAMAAGLSMRPAAPSRPFREPRPHAATAVELARHAEFVAALNQPLWHDSP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagataatcttcgatacggaaaccacggggctcgaccccagatcgggacatcga
ctggtcgagatcggatgcatcgagctggtcgatcgccgcgagtcgggccggacctttcac
gcctatttccatcccgaacgcgacatgccgcccgaggccgaggcggtgcacggcctgtcg
atccagttcctgtcggacaagccgctgttcgccgagcgcgccgacgagctgctcgaattc
ctgggcgacgcgccgatgatcgcgcacaacgccgtcttcgacttcggcttcatcaacgcc
gagctcgaacgcgtcgggcgtccggcgctcgacctcgcccgcatgtgctgcaccgtgcag
atggcgcgcaagctgcatccgggcgccaagcacagcctcgacgcgctctgcacccgctac
ggcatcgaccgcagccaccgcatcaagcacggcgcgctgctcgacgccgagctgctcgcc
cacctctatatcgagatgaccggcggccggcagatcgggcttggtctgggcgccgagtcc
gccgcgatggcggcgggcctgtcgatgcgacccgccgccccgtcccgcccgtttcgcgag
ccgcgcccgcacgccgccaccgcggtcgagctggcgcgccatgccgaattcgtcgccgca
ctcaatcaacctttgtggcacgatagcccgtga
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