Sphingopyxis granuli: SGRAN_0368
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Entry
SGRAN_0368 CDS
T04372
Symbol
ssb2
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03030
DNA replication
sgi03430
Mismatch repair
sgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGRAN_0368 (ssb2)
03430 Mismatch repair
SGRAN_0368 (ssb2)
03440 Homologous recombination
SGRAN_0368 (ssb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgi03032
]
SGRAN_0368 (ssb2)
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_0368 (ssb2)
03029 Mitochondrial biogenesis [BR:
sgi03029
]
SGRAN_0368 (ssb2)
DNA replication proteins [BR:
sgi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SGRAN_0368 (ssb2)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SGRAN_0368 (ssb2)
TLS (translesion DNA synthesis) factors
Other SOS response factors
SGRAN_0368 (ssb2)
Mitochondrial biogenesis [BR:
sgi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
SGRAN_0368 (ssb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
AMG72764
UniProt:
A0AA86GGV0
LinkDB
All DBs
Position
complement(379258..379812)
Genome browser
AA seq
184 aa
AA seq
DB search
MAGSVNKVILIGNLGADPEIKSFQNGGRIANIRIATSESWKDRMTGERKERTEWHNVVIN
GDGLVGVVERYLKKGSKVYVEGSLRTRKWQDRDGNDRYTTEVVIAGMGGALTMLDGAPGG
GGSRGGGDWGGGGGSGSGDSWGEGGGGGSSGGGGWNQGGGGSGGGGGGGGRPPFDDDLDD
DVPF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcgtcaacaaggttatcctgatcggcaatctgggcgccgatcccgaaatc
aagtcgttccagaacggcggccggatcgctaatatccgcatcgccacctccgaaagctgg
aaggatcggatgaccggcgagcgcaaggagcgcaccgaatggcacaatgtcgtcatcaac
ggcgacgggctggtcggcgtcgtcgagcgctatctgaagaagggcagcaaggtctatgtc
gaggggtcgctgcgcacccgcaagtggcaggaccgcgacggcaacgaccgctatacgacc
gaggtggtgatcgccggcatgggcggcgcgctgacgatgctcgacggcgcccccggcggc
ggcggatcgcgcggcggcggtgactggggcggcggcggcggatcgggttcgggcgacagc
tggggagagggcggcggcggcggttcttccggcggcggcggctggaaccagggcggcggc
ggatcgggcggcggtggcggcggtggcggacgtccgcccttcgacgacgacctcgacgac
gatgttccgttctga
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