Sphingopyxis granuli: SGRAN_0404
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Entry
SGRAN_0404 CDS
T04372
Symbol
rlpA2
Name
(GenBank) RlpA-like protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgi01011
]
SGRAN_0404 (rlpA2)
Enzymes [BR:
sgi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SGRAN_0404 (rlpA2)
Peptidoglycan biosynthesis and degradation proteins [BR:
sgi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SGRAN_0404 (rlpA2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Barwin
Motif
Other DBs
NCBI-ProteinID:
AMG72800
UniProt:
A0AA86GI59
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All DBs
Position
complement(420686..421096)
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AA seq
136 aa
AA seq
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MRRSMGLALALLLAPSLWSAAPAIAQDQGPGEADADDGTEMGSGVASYYSDELAGNRTAS
GEPFDPDELTAAHRTLPFGSKVRVTNIANGQSVVVRINDRGPFGRGRVIDVSHAAAKEIG
MHRSGTARVNMTLLDD
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgttcgatgggattggccctggccttgctgttggccccgtccttgtggtcggcc
gcgccggcgatcgcgcaggatcagggtccgggcgaagccgacgccgacgacggcaccgaa
atgggcagcggcgtcgccagctattacagcgacgaactcgccgggaaccgcaccgcgagc
ggcgaacccttcgatcccgacgaactgaccgccgcgcaccgcacgctgccgttcggcagc
aaggtgcgcgtgaccaacatcgccaacggacagagcgtcgtcgtccgcatcaacgaccgc
ggccccttcggccgcggccgcgtgatcgacgtcagtcacgccgccgcgaaggagatcggc
atgcaccgctccggcaccgcgcgcgtcaacatgaccttgctcgacgactga
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