Sphingopyxis granuli: SGRAN_0471
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Entry
SGRAN_0471 CDS
T04372
Name
(GenBank) YD repeat protein
Organism
sgi
Sphingopyxis granuli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
YwqJ-deaminase
dCMP_cyt_deam_1
Motif
Other DBs
NCBI-ProteinID:
AMG72867
UniProt:
A0AA86GH86
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Position
complement(501128..505411)
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AA seq
1427 aa
AA seq
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MSLFDASGMLNGPSHIIQRGRKVHPGIALRRFVAGIALAFAGLFTIPGMAQEMPQPISPI
AIEPDPNGVNLATGKATPDTLTLSVPAAPRLKFDQIQNAAPFIKGNEIRDFDDDGELSGA
WTAHTIDGVSEAFQCDWEFLANTTIKRCDSVTGKGSSLAYNGKTYRQSGTGAKYNYSLVH
LFTIPPPSNPYPQHVRQFYASSVEYPDGEVISFAYDTAGLPGDSYGRVFYRPIQVSTNLG
YHISIAYHGSVLGEPNWGKPSQATLYKTSAPSTPIARLTYGLDGSVTDLNGRVYHGFDPG
ALGVETETASYSQKLPTESTNTLVVTPKSGLPALAQMIGSINRDGSVWNYSYTSPTYAPE
LGGYTYSAVNVTGPAGYAASYTVQLGGAIKTIGLSNRITQVKDELNRTTSYEYDGNGRVT
KIIEPEGNSVTVVYDAAGNISTRTMAAKPGSGLANIVTQAHVDLAPYTDANGVLDCKLTS
LCWRPVWTRDALNHQTDYVYNARGQLTQQTDPADQNGVRRRTINEYAEVDTGAGFVSRKT
VTRVCGVTTTCGTTQELRTVYSYWGNSFLPSSVRQVDQAAGLTSETTYSYDAAGRLLVTD
GPVAGTSDASYNRYDIHGRKTWEIGPAATDGVRQAKRYTYRDSDDKVIAVESGYVTDPNA
TALTQTFSRIDTSYSAARYPIREKVSSGGTTLQITDKSFDGRGQPVCTAVRMNPAVFATV
TTDACVAGTSGSQGADRITKNIYDDAGQLLKVQRAVGTPIQQDYATYTYTSNGKQASVTD
AKGNRSGYTYDGFDRLSRWNFPSPATPGQASTTDYEQYGYDANGNRTSLRKRDGSLLTYQ
YDALNRNIVKLVPERSGLAVTHTRDVYTGYDLRNNPLYVRFDSATSGSDGLTYGYDGLGR
QTSAALKMDGVTRTLGYAYDIAGRRTSVTHPDAQAFTYQYDGAARVTAILQGATSLAAFT
YNGQGLPATLGAGVATSYGYDNLGRLTSLTHDLASTANDVSYTLDYNAASQLSNRTLSND
GYGWTGSVDVNRAYGVNGLNQYTSAGAANFTYDTNGNLTGDGTKTYLYDIENRLVGTGGS
ATASLRYDPLGRLYETVGGGLTTRFLYDGDELVGEYHAAGTLQRRYVHGASVDDPIIWYE
GASVATTALRRLRANWQGSIVAIADDAGAALAINGYDEWGIPSATNSGRFQYTGQAWLPE
IGLYYYKARIYSPTLGRFLQTDPIGYEDGLNWYAYVGNDPVNRSDPDGKQSDSVMDRRNQ
ALRDVGKDCAGQGAACGKMMAQGIAVGVAGSAIIAAAAATAPETAAVAATNAARTAVTEA
VAGGSTRGAVSGLVTRAKEVFTGASTRAGGPGVPTNPTVAKIAENVPASSRSVFHGCCGE
VNAVSRALNAGADVAGSTIRTISVQTGKVMEACSSCKAILQEFGIKF
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcttcgacgcatcgggaatgttgaacggcccatctcacatcatacagcggggg
cgaaaagtgcatcctggcatcgcgttgagacggttcgttgccgggatcgccctcgccttc
gccggtctcttcacgattccgggaatggcgcaggagatgccgcagccgatctcaccgatc
gcaatcgaaccggatcccaatggggtcaacctcgccaccggcaaggccacccctgatacg
cttacgctgtcggtgccggccgcgccgagattgaaattcgaccagattcagaatgcggcc
ccctttatcaagggtaacgagattcgggatttcgacgatgatggcgaactgagcggcgcc
tggacggcgcataccatagatggagtatcggaagccttccagtgcgactgggaatttctt
gccaatacgacaatcaagcgatgcgatagtgtgaccggcaagggctcatcgcttgcctat
aatggcaaaacctatcggcaaagcggtacgggcgccaaatataactacagcctcgttcat
ctgttcaccattccgccaccaagcaatccataccctcagcacgtccggcaattttatgca
tcgagcgtcgaatatcccgatggcgaagtgatcagcttcgcctatgacaccgccggtctt
cctggggacagctacggtcgcgtcttctatcgcccgatccaggtttcgacgaatctcggc
taccatatttcgatcgcctatcacggatcggtgctcggagagcccaattggggcaagccg
agccaggcgacgctgtacaagacgagcgcgccgagcacccccatcgcgcgtctgacctat
ggtctagatggatcggtcacggatctgaacggccgcgtttatcatgggtttgaccctggc
gcactcggcgtcgagaccgagacggcgagttattcgcagaaactcccgaccgaaagcacc
aatacgctggtcgttacgccgaagtccggcctgccggcattggcgcagatgatcggttcg
atcaaccgtgacggctcggtctggaactatagctataccagcccgacctacgctccggag
cttggcggctatacgtacagcgccgtcaatgtcaccggcccggccggttacgcggccagc
tacaccgtgcagttgggcggggcgatcaagactatcgggctcagcaatcgcatcacccag
gtcaaggatgagctcaaccgcacgacgagctatgaatatgacgggaacggccgcgtcacg
aagattatcgagccggaaggcaattcggtaacggtcgtctatgacgccgcgggcaatatt
tcgacccggacgatggccgcaaagcccggctccggcctcgccaatatcgtcacgcaggcc
catgtcgatctcgcgccctataccgacgcgaacggggttctggattgcaagctgacatcg
ctgtgctggcgcccggtctggacacgcgacgctctcaatcaccagaccgattatgtttac
aacgcgcgcggccagttgacgcagcagaccgaccccgccgatcagaacggcgtccgccgc
cgtacgatcaacgaatatgccgaggtcgataccggggccggattcgtatcgcgaaagacc
gtcactcgcgtgtgcggcgtgacgacgacgtgcgggacgacgcaggagctgcgcaccgta
tacagctattggggcaacagttttctgccctcgtcggtgcggcaggtcgatcaggccgcg
gggctgacctcggaaacgacgtacagctacgacgccgccggacggctgctcgtcaccgac
gggccggtcgcggggacgtcggatgcgagctacaaccgctatgacatccatggccgcaag
acgtgggagatcggcccggccgcgaccgacggtgtccgccaggcgaagcgctacacctat
cgcgacagcgacgacaaggtcatcgccgtcgagtcgggctatgtcaccgatcccaatgcc
acggccctgacgcaaacattttcacgcatcgataccagctatagcgccgcgcgctatccg
atccgcgaaaaagtatcgagcggcggcaccacgctgcaaataaccgacaaatccttcgac
ggccgcggccagccggtctgcaccgccgtccggatgaacccggcggtgttcgcgacggtc
acgaccgatgcctgcgtcgccggaacgtcgggcagccagggtgccgaccggatcacgaag
aacatctatgacgatgccgggcagctgctgaaggttcagcgcgcggtgggaaccccgatc
cagcaggattatgcgacctacacctatacgtcgaacggcaaacaggcgagcgtcaccgac
gccaagggcaatcgctccggctatacctatgacgggttcgaccggctgtcgcgatggaat
ttcccttcgccggccacccccggccaggcttcgaccaccgattacgaacaatatggctat
gacgcgaacggcaaccggaccagcctgcgcaaacgcgacgggagccttttgacctatcaa
tatgatgcgctgaaccggaacatcgtcaagctggtccccgaacgctcggggcttgcggtg
acgcatacgcgcgatgtctatacgggctacgacctgcgcaacaatccgctctacgtccgc
ttcgacagcgcgacgagcggttcggacgggctgacctatggctatgacggcctcggccgt
cagacgagcgcggcgctgaagatggacggcgtgacccgaacgctgggctatgcttacgac
atcgcgggccggcggacatcggtgacacacccggacgcgcaggccttcacctatcaatat
gacggcgcggcgcgggtgacggccattctccagggggcgacgtcgctggcggcgttcacc
tataacggccagggccttcccgcgacgctgggggccggagtggcgacgagctacggctat
gacaatctgggccgtctgacgagcctgacgcacgacctggcgtcgacggcgaacgacgtg
agctatacgctggactataatgcggcgtcacagctttcgaaccggacgctgtcgaacgac
ggctatgggtggacgggctcggtcgatgtgaaccgggcgtacggcgtcaacgggctcaac
cagtatacgtccgccggggccgcgaacttcacctatgatacgaacggcaatctgaccggc
gacgggacgaagacctatctctacgacatcgagaaccggctggtgggcacgggcggcagc
gcgaccgcgagcctgcgctacgatccgctgggccggctctatgaaaccgtcggcggcggg
ttgacgacgcgcttcctctacgacggcgacgagctggtcggggaatatcatgcggcgggc
accttgcagcggcgctatgtgcacggggcgagcgtcgacgatccgatcatctggtacgag
ggagcgagcgtcgccaccaccgcgctgcgtcggctgcgcgcgaactggcaggggagcatc
gtggcgatcgccgacgatgcgggcgccgcgctcgcgatcaacggctacgacgaatggggt
atcccctcggcaaccaacagcgggcggttccagtacaccggccaggcgtggctgcccgag
atcgggctctattactacaaggcccgcatctactcccccaccctcggacggttcctgcag
accgatcccatcgggtatgaggatgggctcaactggtatgcctatgtcgggaacgatccc
gtcaataggagcgatccagatggaaagcagtccgactctgtcatggatcgccgaaaccag
gcactgcgcgacgtcggaaaagattgtgcggggcagggtgcagcttgtgggaaaatgatg
gcgcagggcatcgcagttggagtcgcggggagcgcaattatcgccgccgctgccgcaact
gcaccagaaactgcggctgtggcagcgactaatgcagctcgaacggcagtgaccgaggca
gttgctggaggctcgacacgaggtgcggtctccggcctcgttactcgcgcaaaggaggta
ttcacaggcgccagcacccgcgccggggggcctggagttccgactaatccaaccgttgca
aagatagctgaaaatgtcccagcctcttctcgctcggtgtttcatggctgttgcggggaa
gtcaatgccgttagtagagcattgaacgcgggcgcggatgttgcgggctcgacaataagg
accatcagtgtgcagactgggaaagttatggaagcctgttcgagttgtaaagcaattctg
caagagtttggaattaagttttaa
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