Sphingopyxis granuli: SGRAN_0830
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Entry
SGRAN_0830 CDS
T04372
Name
(GenBank) Putative autotransporter YapH
Organism
sgi
Sphingopyxis granuli
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
AMG73224
UniProt:
A0AA86L1I1
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All DBs
Position
complement(883121..887857)
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AA seq
1578 aa
AA seq
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MILSLKQKFLISSAFLVPAAAAQAQTVGIVNDQAARLSIDVGPAETVCGDGIGILANNGP
VDVTNAGAICGNGTSGSNDSPDGGIVLRAGSSHIVNSGTINATMFGIATDAYYNAETDSF
ESNAPRTRVENSGQIIGSQNDGIRLFGGGSVTNSGSIQGQWGPLTDGVSMLASALTPGEA
VTLDNAAGGTIAGARFGAILSGPSTIDNAGTISGGEAAITVQSDPILGGTASIRNGGTLT
GGDGVRVGGLLEQALIDNSGTISGTDAHGIVNDQPGLLVVDNRAAGQISGARSAIVARGG
GVTVTNEGVIRGNGADAGNTTPDGGVILLAGSSSIVNGGTISGATFGIATDAYYNAATDS
FESNAGATSIRNSGTIIGEANDGIRLMGGGTVVNSGTIRGVSGSLTDGVSMLASALRPGE
IVSLDNAASGLITGDRFGAILSGPSAIANAGTISGGVAAIAVQSDPVLGGAAAIRNSGTL
TGADGATFGGILEQASLENSGTITGTAGSGIANNQSGALTIDNRAGGTITGAMSGVLARL
GAVDIANSGTIRGNGAAASDAGVFVSAGESRIVNEGVISGAGGGIVAGDFREPGTNDLIV
FAAATEVANSGTIAGESNDGLRLMGGGSVTNSGTISGTGASLADGISIFRHDAQAQADYV
AQVTNAAAGTIIGERFGIILSGGGTIANAGTIDGTVGGVLVQGDAGGPDGFTASIVNSGT
IASADGAALISFVRATVENSGTLRGGAGVAIELGDYDDKVTLRTGSAITGAIEAGAGTDT
LALEGDILELTTAQMLGAAHDFEILNVDAGYWSTSGAVGAFDTVSIGAGAALHINEAAGA
NPIGAASVANAGRLVLDFDDDAALSGFADIAMTGTGAVELVGDAVLTLDTANMAHSGGTT
VANGGLVLTGQLAGDVRTQGDGVFTLGAGGTEGSFAGSIVNDGRFVFDRSDSYDFLGAFS
GSGILDKRGAGTLAFLGDYSFQGVTNIFGGSVRIGGVIAPETQFDLGAEGTLDITGTDQV
IGGLSGEDHSQVVVGANQLTVDQSDDSRFGGTISGTGGLVKTGAGTLNLTGDNVYTGPTT
INGGTLAVNGSIASPVTINAGGVLGGNGTVGSTTALAGGIIAPGNSIGRLTVAGDLAFAA
GSTYEVEANAAGEADRIDATGRVTISATAKVAVLAESGDYRPRTDYVILTGAGGVEGRFG
SVTSNLAFLDPLLRYGADRVTLSLYRNDIGFADVALGFNQTGVAAAIESLGFDNPLFEAV
LVQSAATAQTAYTELSGELLSGAVSGLTDESRHLRGALLGLPVPDEGGLFVWGSAFGGWG
DFDARGGQRAMDTDHKGLVAGVGIGGNGFAAALSAGIGNSDFRQGGRGDHADVDSKYLAL
HARYGTGTGFSGALGVSYGWHAIDTSRTVTVAPLAQTLTSGRDADTLQLFGEMGYDLAAG
GAAITPFARLAHVRTRSDDFAETGGSGALAVADAGQDTSFLSLGVRGRLNADAPGFQPYA
SLAWNRAFGDRAALANGRFVAGGPSFAIRGSAIPKNAAEVEAGFDYRAGGFHIGAAYSGA
LASGRQSHGARITARIAF
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgattctttcgctgaaacagaaatttctcatttcttcggccttcctggtcccggccgcc
gcggcgcaggcccagaccgtcggcatcgtcaacgatcaggccgcgcgcctgtcgatcgac
gtcggcccggcagagaccgtctgcggcgacgggatcggcatcctggcgaacaatggcccc
gtcgacgtgaccaacgccggggcgatctgcggcaacgggacgagcggcagcaacgacagc
cccgacgggggcatcgtcctccgcgccggttcgtcgcacatcgtgaacagcgggacgatc
aacgcaacgatgttcggcatcgccaccgatgcctattacaatgctgaaaccgacagtttc
gaatcgaacgccccgcggacccgcgtcgagaacagcggacagattatcggcagccagaac
gacggcatccgcctgttcggcggcggcagcgtcaccaacagcggctcgatccagggccag
tggggaccgctcaccgacggcgtctcgatgctggcgtcggccctgacgccgggcgaagcg
gtcaccctcgacaatgcggcgggcgggacgatcgcgggcgcgcggttcggcgccatcctc
agcggtccgtccaccatcgacaacgccggcacgatcagcggcggcgaggcagccatcacg
gtgcagagcgacccgatcctcggcggcacggcatcgatccgcaacggcggcacgctgacc
ggcggcgacggcgtccgcgtcggcggcctgctcgaacaggcgctgatcgacaacagcggc
accatctcgggcacggacgcccatggcatcgtcaacgatcagcccggcctgctggtcgtc
gacaatcgcgccgcggggcaaatttcgggtgcccggtccgcgatcgtcgcgcgcggcggc
ggcgtcaccgtcaccaacgagggcgtcatccgcggcaacggtgccgatgcgggcaatacc
acgcccgacggcggcgtcatcctgctggcgggatcgtcgtcgatcgtcaacggcggcacg
atcagcggcgcgacattcgggatcgcgaccgacgcctattacaatgcggcgaccgacagc
ttcgaatcgaatgcgggggccacgtcgatccgcaacagcgggacgatcatcggcgaggcg
aatgacggcatccggctgatggggggcggcaccgtcgtcaacagcggcacgatccgcggc
gtgtcgggatcgctgaccgacggcgtctcgatgctcgcttcggccctgcggccgggcgag
atcgtcagcctcgacaatgcggccagcggcctgatcacgggcgaccgtttcggcgccatc
ctctccggcccgtccgccatcgccaacgccggcacgatcagcggtggggtggcggccatc
gccgtccagagcgacccggtcctcggcggagcggcggcgatccgcaacagcggcacgctg
accggcgccgacggcgccaccttcggcggcatcctggagcaggcgtcgctcgaaaacagc
ggcaccatcaccggaacggccgggtccggcatcgcgaacaaccagtcgggcgcgctgacg
atcgacaatcgggccgggggcacgatcaccggcgcgatgtcgggcgtgctggcgcggctg
ggggctgtggatatcgccaacagcggcacgatccgcggcaacggcgccgcggcatccgac
gccggcgtcttcgtctccgcaggcgaatcgcgcatcgtcaacgagggcgtcatttcgggc
gcgggcggcggcatcgtcgcgggcgatttccgcgagccgggcacgaacgacctcattgtt
tttgcggcggcgaccgaggtcgcgaacagcggcaccatagccggcgaaagcaacgacggg
cttcgcctgatgggcggcggcagcgtcaccaacagcggcacgatcagcggcaccggcgcc
agccttgccgacggcatctcgatcttccgccacgatgcgcaggcgcaggccgattatgtc
gcgcaggtcaccaacgccgccgccggcacgatcatcggcgagcggttcggcatcatcctg
tcgggcggcggcacgatcgccaacgccggcaccatcgacggcacggtcggcggcgtgctg
gtgcagggcgatgcgggcgggcccgacggcttcaccgcgagcatcgtcaacagcggcacg
atcgccagcgccgacggcgcggcgctgatcagcttcgtccgggcgaccgtcgagaatagc
ggcacgctgcgcggcggcgcaggcgtcgccatcgaactcggcgactatgacgacaaggtg
acattgcgcacgggcagcgcgatcaccggcgcgatcgaagcgggggcaggcaccgacacg
ctcgctctcgaaggcgacatattggaactcacgaccgcgcagatgctcggcgccgcgcat
gatttcgagatattgaacgtcgacgcgggctattggtcgacctcgggggcggtcggcgcc
ttcgataccgtgtcgatcggcgcgggcgcagccctgcacatcaacgaagccgccggggcg
aacccgatcggtgccgcgtcggtggcgaacgccggacggctcgtgctcgatttcgacgac
gatgccgcactatccggcttcgcggacatcgccatgacgggaaccggcgcagtcgagctc
gtcggcgacgccgtgctcacgctggacaccgccaacatggcccacagcggcggcacgacg
gttgcgaacggcgggctcgtcctgaccggacagctcgccggcgacgtccggacacagggc
gacggcgtcttcacgctcggcgcgggcggcaccgaaggaagctttgcgggctccatcgtc
aacgatggccgcttcgtcttcgaccggtccgacagctatgatttcctcggcgccttttcg
ggcagcggcatcctcgacaagcgcggcgccggcacgctggccttcctcggcgattacagc
tttcagggcgtcaccaacatcttcggcggctcggtccgcatcggcggcgtcatcgcgccg
gaaacgcagttcgacctcggcgccgaggggacgctcgacatcaccggtacggatcaggtg
atcggcggcctgtcgggcgaggatcattcgcaggtcgtcgtcggcgccaaccagttgacc
gtcgaccagagcgacgacagcaggttcggcggcacgatttcggggaccggcggcctcgtc
aagaccggcgccgggacgctgaacctgaccggcgacaatgtctacaccgggccgacgacg
atcaacggcggcacgctcgcggtcaacggttcgatcgcctcgccggtgacgatcaatgcg
ggcggcgtgctcggcggcaacggcacggtcggttcgaccaccgcgctcgcgggcggcatc
atcgcgcccggcaactcgatcgggcgcctgacggtcgccggcgacctcgcgttcgcggcc
gggtcgacctatgaggtcgaggccaatgccgcgggcgaggccgatcggatcgacgcgacg
ggccgggtcacgatcagcgccacggcgaaggtcgcggtgctggcggagagcggcgattac
cggccgcgcaccgactatgtcatcctgaccggcgcgggcggcgtcgagggacgcttcgga
tcggtgacgtcgaacctcgccttcctcgatccgctgctgcgctatggcgccgatcgcgtg
acgctgtcgctctatcgcaacgacatcggtttcgccgacgtcgcgctggggttcaaccag
acgggcgtcgccgcggccatcgaatcgctcggtttcgacaatcccctgttcgaggcggtg
ctcgtgcagagcgcggcgaccgcccagacggcctataccgagctgtcgggcgagctgctt
tcgggcgcggtcagcgggctgaccgacgagagccgccatctgcgcggcgccctgctcggc
cttcccgtcccggacgaaggcggcctgttcgtgtggggatcggccttcggcggctggggc
gatttcgatgcccgcggcggccagcgcgcgatggacaccgatcacaaggggctggtcgcc
ggcgtcggcatcggcggcaacggcttcgcggcggcgctctccgcgggcatcggcaactcc
gatttccggcagggcgggcgcggcgaccatgcggacgtcgacagcaaatatctggcgctc
catgcccgctacggcaccggcacgggcttcagcggcgcgctcggggtcagctatggctgg
cacgccatcgacaccagccgcaccgtcaccgtcgcgccgctcgcccagacgctgacctcc
ggccgcgacgccgacacgctccagctcttcggcgaaatgggatatgatctggcggcgggc
ggcgccgcgatcacgcccttcgcgcgcctcgcccatgtccgcacccgcagcgacgatttc
gcggagacgggcggcagcggcgcgctcgccgtcgccgacgccgggcaggacaccagcttc
ctcagcctcggcgtccgcgggcgcctcaacgccgacgcgccgggctttcagccctatgcg
tcgctggcgtggaaccgcgcgttcggcgaccgcgcggcgctggcgaacggccggttcgtc
gcgggcggaccatcgttcgcgatccgcggcagcgcgatcccgaagaatgcggcggaggtc
gaggccggcttcgactatcgcgcgggcggcttccacatcggcgcggcctacagcggcgcc
ctcgcctcgggccgccagagccacggcgcgcggatcacggcgcggatcgccttctga
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