Sphingopyxis granuli: SGRAN_1014
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Entry
SGRAN_1014 CDS
T04372
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGRAN_1014 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgi03019
]
SGRAN_1014 (groL1)
03110 Chaperones and folding catalysts [BR:
sgi03110
]
SGRAN_1014 (groL1)
03029 Mitochondrial biogenesis [BR:
sgi03029
]
SGRAN_1014 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgi04147
]
SGRAN_1014 (groL1)
Enzymes [BR:
sgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SGRAN_1014 (groL1)
Messenger RNA biogenesis [BR:
sgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SGRAN_1014 (groL1)
Chaperones and folding catalysts [BR:
sgi03110
]
Heat shock proteins
HSP60 / Chaperonin
SGRAN_1014 (groL1)
Mitochondrial biogenesis [BR:
sgi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SGRAN_1014 (groL1)
Exosome [BR:
sgi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SGRAN_1014 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
SGRAN_1014 (groL1)
Exosomal proteins of breast cancer cells
SGRAN_1014 (groL1)
Exosomal proteins of colorectal cancer cells
SGRAN_1014 (groL1)
Exosomal proteins of bladder cancer cells
SGRAN_1014 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AMG73408
UniProt:
A0AA86GIY3
LinkDB
All DBs
Position
1089780..1091423
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFSRDARERILKGVDILADAVKVTLGPKGRHVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKANDKAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVGKVVEDLAARSTPVSGSSEIAQVGIISANGDTEVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMTVELADPYILIFEKKLSNLQSMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTQGEM
ISEDLGIKLESVTLNMLGQAKRVTIDKDNTTIVDGAGEADAIKARVEQIRAQIETTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVSGGGTALL
YATKVLDGLKGVNDDQTRGIDIVRKAIEAPLRQIAANAGHDGAVVAGNLLREDNVDQGFN
AATDTYENLKAAGVIDPTKVVRTALQDAASVAGLLITTEAAVSELPEDKPAMPMGGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgttaaattttcgcgcgacgcgcgcgagcgcatcctcaagggcgtc
gacatcctcgccgacgccgtcaaggtcacgctgggccccaagggccggcatgtcgtgatc
gacaagagcttcggcgctccccgcatcaccaaggacggcgtcagcgtcgccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaggtcgccagcaag
gcgaacgacaaggccggtgacggcaccaccaccgcgaccgtgctggcgcaggcgatcgtc
cgcgaaggcatgaagtcggtcgccgcgggcatgaacccgatggacctcaagcgcggcatc
gacctcgccgtcggcaaggtggtcgaggatctcgccgcccgctcgacgccggtatcgggc
tcgtcggaaatcgcgcaggtcggcatcatctcggccaacggtgacaccgaagtcggcgag
aagatcgccgaggcgatggagaaggtcggcaaggaaggcgtcatcaccgtcgaggaagcc
aagggtctcgaattcgaactcgacgtcgtcgagggcatgcagttcgaccgcggctatctg
agcccctatttcatcaccaaccctgaaaagatgacggtcgaactcgccgatccgtatatt
ctgatcttcgagaagaagctgtcgaacctccagtcgatgcttccgatcctcgaagcggtc
gtacagtcgggccgtccgctgctgatcatcgccgaggacatcgaaggcgaagcgctggcg
accctcgtcgtcaaccgtctgcgcggcggcttgaaggtcgcggcggtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctgcaggacatcgcgatcctgacgcagggcgagatg
atcagcgaagacctgggcatcaagctcgaatcggtcacgctgaacatgctgggccaggcg
aagcgcgtcaccatcgacaaggacaacacgaccatcgtcgacggtgccggcgaagccgac
gcgatcaaggctcgcgtcgagcagatccgtgcccagatcgagaccacgaccagcgactac
gaccgtgaaaagctgcaggaacgtctggcgaagctcgccggcggcgttgcggtgatcaag
gtcggcggcgcgaccgaggtcgaggtgaaggagcgcaaggaccgcgtcgacgacgcgctg
cacgcgacccgcgccgcggtcgaggaaggcatcgtctcgggcggcggcactgcgctgctc
tatgcgaccaaggtgctcgacgggctgaagggcgtcaacgacgaccagacgcgcggcatc
gacatcgtccgcaaggcgatcgaagcgccgctgcgccagatcgcggccaacgccggccac
gacggcgcggtcgtcgcgggcaacctgctgcgcgaagacaatgtcgatcagggcttcaac
gccgcgaccgacacttatgagaatctgaaggctgccggcgtcatcgacccgaccaaggtc
gtgcgtaccgcgcttcaggatgcggcgtcggttgccggcctgttgatcaccaccgaagcg
gcggtcagcgagctgcccgaagacaagccggcgatgccgatgggcggcggcggcatgggc
ggcatgggcggcatggacttctaa
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integrated database retrieval system
