Sphingopyxis granuli: SGRAN_1314
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Entry
SGRAN_1314 CDS
T04372
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03030
DNA replication
sgi03410
Base excision repair
sgi03420
Nucleotide excision repair
sgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGRAN_1314 (polA)
03410 Base excision repair
SGRAN_1314 (polA)
03420 Nucleotide excision repair
SGRAN_1314 (polA)
03440 Homologous recombination
SGRAN_1314 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgi03032
]
SGRAN_1314 (polA)
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_1314 (polA)
Enzymes [BR:
sgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGRAN_1314 (polA)
DNA replication proteins [BR:
sgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SGRAN_1314 (polA)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SGRAN_1314 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SGRAN_1314 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AMG73705
UniProt:
A0AA86L3B3
LinkDB
All DBs
Position
complement(1428750..1431557)
Genome browser
AA seq
935 aa
AA seq
DB search
MSEKNHLYLVDGSSYIFRAYHRLPPLTNPRGVPVGAVYGYTTMLWKLAKDLHAADGPTHL
AVILDHSSQSFRNEIYDQYKANRPDPPADLVPQFPLIRDATRAFSLPCIEMEGFEADDLI
ASYTEAAVREGWDVTIVSSDKDLMQLVREGNGAPEVDMLDTMKNVRLGLDAVQEKFGVGP
ELVGDVLALMGDSVDNVPGVRGVGPKTATKLIVEYGDLEAALAGAATMKPSKLRDNLIEH
AEMARLSRILVDLKRDCPLPEPMEGFRLDAIPPEPLKLFLDEHGFRSLSAKLDTGTTPGG
PPTLPRATDAGAATAAPSTPTLPPMPPIDRSLYETVTTIEALDRWIDAARAAHVVAVDTE
TASLDSVTGTLVGVSLSTGLGKACYIPLGHGGTDMFAEKPEQVPVADALGRLHSLFTDEA
VLKVGHNLKYDIGVLAQHGVRIAPYDDTLVMSFALDAGKHGHGLDELAKLHLDHTCLTFK
EMCGTGKSQISFAEVQLARATEYAAEDAEVAWRLWKLLKLRLPLEGGTRVYEMVDRPLVA
TVEAMERAGIMVDRDYLARLSGEFANAMLRTEGEIHALAGQPFVIGSPKQLGEILFDKLG
LKGGRKGKSGDWSTDQNELERLERDGVPIARKVLEWRQLAKLKSTYTDALQQQINAKTGR
VHTSYSLVGAQTGRLSSTDPNLQNIPIRTEVGRQIRDAFIAAPDHVLMAADYSQIELRLA
AHMADVPELKQAFAQGQDIHAATAIELFGEVNRDTRAKAKTINFAILYGISRWGLAGRLE
ITPDEAQALISRYFERFPGISDYIQATLEGAREHGYTETLFGRKTWFPRIKAANQNERQG
SERAAINAPIQGTSADLIKRAMARMPGALADAGLSDVTMLLQVHDELVFEAPEAKAEAAG
AVIRRVMMGAAEPILKLSVPIDVEIGVGKSWGDAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaagaatcacctctatctggtcgacggctccagctacatctttcgcgcctat
caccgcctgccgccgctgacgaacccccggggcgtgccggtcggcgccgtctatggctac
accaccatgttgtggaagctcgcgaaggatctgcacgccgccgacggcccgacgcacctt
gccgtcatcctcgaccattcgagccagtcgttccgcaacgaaatctatgaccagtacaag
gcgaaccggcccgatccgcccgccgacctggttccgcaattcccgctgatccgcgacgcg
acgcgcgccttctcgctgccgtgcatcgagatggagggtttcgaggccgacgacctgatc
gccagctataccgaggccgcggtgcgcgaggggtgggacgtcaccatcgtcagcagcgac
aaggacctgatgcagctcgtccgcgagggcaatggcgcgccggaggtcgacatgctcgat
acgatgaagaacgtccggctcggtctcgacgcggtgcaggaaaaattcggcgtcggtccc
gaactggtcggcgacgtgctggcgctgatgggcgacagcgtcgacaacgtccccggcgtg
cgcggggtcggacccaagaccgcgaccaagctgatcgtcgaatatggcgacctggaggcg
gcgctggcgggcgccgcgacgatgaagccgtcgaagctgcgcgacaatctgatcgaacat
gcggagatggcgcggctgtcgcgtattctggtcgacctcaagcgcgactgcccgctgccc
gagccgatggagggtttccggctggatgccatcccgcccgagccgttgaagctcttcctc
gatgagcatggcttccgttcgctgtcggcgaagctcgacaccgggacgacgccgggcggt
ccgccgacgctgccgcgtgcgacggatgcgggcgctgccaccgccgcgccatcgactccg
acgctgccgccgatgccgccgatcgaccgctcgctctacgagacggtgacgacgatcgag
gcgctcgaccgctggatcgacgcggcgcgcgccgcgcatgtcgtcgcggtcgataccgag
accgcgagcctcgacagcgttaccggcacgctcgtcggggtcagcctgtcgaccggcctg
ggcaaggcctgttatatcccgctcggccacggcggcaccgacatgttcgccgaaaagccc
gaacaggtgccagtcgccgatgcactcggccggctccattcgctgttcaccgacgaggcg
gtgctcaaggtcggccacaacctcaaatatgacatcggcgtgctcgcgcagcacggggtg
cgcatcgcgccctatgacgacacgctggtgatgagcttcgcgctcgacgcgggcaagcac
ggccacgggctcgacgaactggccaagcttcacctcgaccacacgtgcctgaccttcaag
gaaatgtgtggaaccggcaagtcgcagatcagcttcgccgaggtgcagttggcgcgggcg
accgaatatgcggccgaggatgccgaggtcgcgtggcggctgtggaagctgctcaagctg
cgcctgccgctcgaaggcgggacgcgcgtctacgagatggtcgatcgcccgctcgtcgcg
accgtcgaggcgatggagcgcgcggggatcatggtcgaccgcgactatctggcgcggctg
tcgggcgagttcgcgaacgccatgctgcgcacggaaggcgagattcatgcgctcgcgggc
cagccgttcgtgatcggcagccccaagcagctcggcgagatattgttcgacaagctgggc
ctgaagggtgggcgcaagggcaagtcgggcgactggtcgaccgaccagaacgaactggaa
cggctcgagcgcgacggcgtgccgatcgcgcggaaggtcctcgaatggcggcagctcgcc
aagctgaaatccacctataccgatgcgctgcagcaacagatcaacgcgaagaccggccgc
gtccacaccagctacagcctcgtcggcgcgcagaccgggcggctgtcgtcgaccgacccg
aacctccagaacatcccgatccgcaccgaggtcgggcggcagatccgcgacgccttcatc
gccgcgccggaccatgtcctgatggcggcggactatagccagatcgaactccggctcgcg
gcgcacatggccgatgtccccgaactgaaacaggcctttgcgcaggggcaggacattcac
gccgcgaccgcgatcgagctgttcggtgaggtcaaccgcgatacgcgcgccaaggccaag
acgatcaacttcgccatcctctacggcatctcgcgctggggcctcgcggggcggctggaa
atcacgcccgacgaggcgcaagccttgatcagccgctatttcgagcgcttccccggcatc
agcgactatatccaggccacgctggagggcgcgcgcgaacatggctataccgagacgctg
ttcggtcgcaaaacctggttcccgcgcatcaaggccgcgaaccagaacgagcggcagggc
agcgagcgcgccgcgatcaacgcgccgatccagggcaccagcgccgacctgatcaagcgc
gcgatggcgcgcatgcccggggcgctcgccgatgccggactgtccgacgtgacgatgctg
ctgcaggtccacgacgaactggtcttcgaagcccccgaggccaaggccgaagccgcgggc
gcggtgatccgccgcgtgatgatgggcgctgccgagccgatactgaagctgtcggtcccg
atcgacgtcgagatcggagtcggcaagagctggggcgacgcgcattga
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