Sphingopyxis granuli: SGRAN_1376
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Entry
SGRAN_1376 CDS
T04372
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi00061
Fatty acid biosynthesis
sgi00071
Fatty acid degradation
sgi01100
Metabolic pathways
sgi01212
Fatty acid metabolism
sgi02024
Quorum sensing
sgi04146
Peroxisome
Module
sgi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SGRAN_1376
00071 Fatty acid degradation
SGRAN_1376
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SGRAN_1376
09145 Cellular community - prokaryotes
02024 Quorum sensing
SGRAN_1376
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgi01004
]
SGRAN_1376
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgi04147
]
SGRAN_1376
Enzymes [BR:
sgi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SGRAN_1376
Lipid biosynthesis proteins [BR:
sgi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SGRAN_1376
Exosome [BR:
sgi04147
]
Exosomal proteins
Exosomal proteins of breast milk
SGRAN_1376
Exosomal proteins of breast cancer cells
SGRAN_1376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AMG73765
UniProt:
A0AA86L3D2
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All DBs
Position
1495900..1497729
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AA seq
609 aa
AA seq
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MKLENPHLDHFPSLVAMFFDRAERGGETPFLWRKADRAWQPLSWRQVANQVAALAYNLRR
LGLRDGDRVVLVSENRPEFCIADLAIMAAGCITVPTYTTNTERDHQHILDNSGASAVIVS
TAKLARTLMPAVLRSNVRLVISMESLRVGQQGNVAIHDWDPLVTGGEAHLDEAKARGLAM
TRDDTACLIYTSGTGGAPRGVMQHHGAILHNAAGAAEVLVNDFGIGDEEVFLSFLPLSHA
YEHSGGQFLPIMVGAQIYYSEGLEKLVSNIEETRPTIMVVVPRLFEVIRARMIKAVEKQG
KLANWMLSQALRVGEKDYERRMGVLDRPVDLLLNKLFRPKIQKRFGGRMKALVSGGAPLN
PEIGVFFHSIGLTLLQGYGQTEAGPVISCNRPAAGLKMDTVGPPLMNTEVRIADDGEICV
RGELVMKGYWRNPAETERVLVPDPAEPEKGPWLHTGDIGHIDEAGRIVITDRKKDLIVND
KGDNVSPQRVEGMLTLQPEILQAMVYGDKRPHLVGLLVPDPEWMDEWAEAEGLPRDLKLL
REHEKFRAAIRAAVDRVNAQLSVIEKVRKFDFADEPFTIENEQMTPSMKIRRHVLKQVYA
DKIAALYRG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggaaaacccccatctcgaccatttccccagcctcgtcgcgatgttcttcgac
cgcgccgagcggggcggcgagacgcctttcctgtggcgcaaggccgatcgcgcgtggcag
ccgctgtcgtggcggcaggtcgcgaaccaggtcgccgcgctggcatataatctgcgccgg
ctggggctgcgcgacggcgaccgtgtcgtgctggtcagcgagaatcgccccgaattctgc
atcgccgacctcgccatcatggcggcggggtgcatcaccgtgccgacctacaccaccaac
acagagcgcgaccaccagcatatcctcgacaacagcggcgccagcgcggtgatcgtctcc
accgccaaactcgcgcggacgctgatgcccgcggtgctgcgctcgaacgtgcggctggtc
atcagcatggaaagcctgcgcgtcggccagcagggcaatgtcgcgatccacgactgggac
ccgctggtcacagggggcgaggcgcatctggacgaggcaaaggcgcggggcctggcgatg
acgcgcgacgacaccgcctgcctcatctacaccagcggcaccggcggcgcgccgcgcggc
gtgatgcagcatcatggcgcgatcctgcacaatgcggcgggcgcggccgaagtgctggtc
aatgatttcggcatcggcgacgaggaggtgttcctgtccttcctgccgctcagccatgcg
tatgagcattcgggcgggcagtttctgccgatcatggtcggcgcgcaaatctattatagc
gaggggctcgaaaagctcgtctcgaacatcgaggagacgcggccgacgatcatggtcgtc
gtcccgcgcctgttcgaggtgatccgcgcgcggatgatcaaggcggtcgaaaagcagggc
aagctggcgaactggatgctgagccaggcgctgcgcgtcggcgaaaaggattatgagcgg
cgcatgggcgtgctcgaccgtccggtcgacctgctgctcaacaagctgttccgcccgaag
atccagaagcgtttcggcggccggatgaaggcgctggtgtcgggcggcgcgccgctgaac
cccgaaatcggtgtcttcttccattcgatcggcctgaccctgctgcaaggctatggccag
accgaggcggggccggtgatcagctgcaaccgccccgcggcggggctgaagatggacacg
gtcggcccgccgctgatgaataccgaggtgcggatcgccgacgacggcgaaatctgcgtg
cgcggcgaactggtcatgaaggggtattggcgcaacccggccgagaccgagcgcgtgctg
gtccccgatccggccgagcccgaaaaggggccgtggctgcacaccggcgacatcggccat
atcgacgaggcgggtcgcatcgtcatcaccgaccgcaagaaggacctgatcgtcaacgac
aagggcgacaatgtgtcgccgcagcgcgtcgaggggatgctgacgctccagcccgagata
ttgcaggcgatggtctatggcgacaagcgcccgcacctggtcggcctgctcgttcccgat
cccgaatggatggacgaatgggccgaagcggaagggctgcccagggacctgaagctgctg
cgcgagcacgagaaattccgcgccgcgatccgcgccgcggtcgaccgggtcaacgcccag
ctctcggtgatcgagaaggtgcgcaagttcgacttcgccgacgaacccttcacgatcgag
aatgaacagatgacgccgtcgatgaagatccgccgccacgtgctgaagcaggtctatgcc
gacaagatcgcggcgctgtatcgggggtga
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