Sphingopyxis granuli: SGRAN_1436
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Entry
SGRAN_1436 CDS
T04372
Name
(GenBank) p pilus assembly protein, porin PapC
KO
K07347
outer membrane usher protein
Organism
sgi
Sphingopyxis granuli
Pathway
sgi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SGRAN_1436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgi02000
]
SGRAN_1436
02044 Secretion system [BR:
sgi02044
]
SGRAN_1436
02035 Bacterial motility proteins [BR:
sgi02035
]
SGRAN_1436
Transporters [BR:
sgi02000
]
Other transporters
Pores ion channels [TC:
1
]
SGRAN_1436
Secretion system [BR:
sgi02044
]
Chaperone-usher system
Type 1 pilus assembly protein
SGRAN_1436
Bacterial motility proteins [BR:
sgi02035
]
Pilus system
Fimbrial proteins
SGRAN_1436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
DUF2527
Motif
Other DBs
NCBI-ProteinID:
AMG73825
UniProt:
A0AA86L3E8
LinkDB
All DBs
Position
1560927..1563416
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AA seq
829 aa
AA seq
DB search
MAGISSLAHALEPILLLAASQPAEPATNTIDQTMAEPVRPPASSITISLPVTLDGRYIGD
IQMDFAGESVTFPAERFVQLIQADVTAATTTLIAQGSSAGILTPQAASVGGLQVRYDSGL
QELQVITLLEARNRRILNVSPGEGADTSPVEVPEAVSLFLNGAISYSHIVEGRRGSNRGR
QPLTGSLEFGGRLFGNAGVAFITRQVYDEAAAHPFRRIESQLIYDDVTRLIRITAGDLRN
RGTNLQALPRMAGLSVERFYGLEPTRVFRPIGQTTFDLERPSTVQVRVNGLVFQELYLNS
GRYDLRDLPLNQGSNAIELVIRDDTGREQIISQNNFFDFDLLATGETDFSAAAGVRSDAP
DGVIRYSNDWIFSGFARHGFSDTFTAGLDAQGDKEGVAIGASAIWASPIGTWRLQASGSE
RKEIGFGYAAGAGYSSTGYFGKDWRWSLRADAQYVDDKFATIGDIALLNGNTIDRAARTR
ISANAQINSSRLSFNLSGDYEKIQGEGTRTTALAGVNYTVNSTLAVGVFGRHVKAPGQSN
TGFFFQLNWTPGRNRLVRATYDTARREVDLNYRYSPQPYVGTTGYEIGLRRSGEIDTAEL
SGRVAHISNRFEATAQHSVLSTANFDGDERIQISRATVASSLVLAGGKVSLSRPVREAFA
IVSRHPTLAKNQILIDRTENGVRAQSDGFGPAVVPDLPTYIRTSTYVDVENLPPGYDLGS
GQFGFKAPLYAGYSVEAGSAASVSMIGSVVNKAGEPLSFIAGQMQRKDRPADEPIPVFTN
RAGRLVGIGLTPGVYVLTLRTDPQYQQDITIDGNGSTLVNIGEIRVDQR
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggccggcatttcgagcctcgcccatgcgctggagccaattcttctgcttgccgcgtct
cagccagcggagccggcaaccaataccatagatcaaacgatggccgagccagttcggccc
cccgcctcgtcgattactatcagcctccccgtgactttggatggacgctatatcggcgat
atccagatggattttgcgggcgagtcagtgactttccctgcggagcgcttcgtgcagctc
atccaagccgacgtgactgccgcgacgactaccttaatcgcgcaaggctcctccgccggg
attttaacgccgcaggcggcatcagtcggcggactacaagttcgatatgactctggatta
caagaacttcaggtcatcacgctcctcgaagcacgaaatcgccgtattctcaatgtcagc
ccgggcgaaggcgcagacaccagccccgtcgaagtgcccgaggccgtttcgctttttctg
aatggcgcgatttcctacagccacatcgtagaagggcgccgcgggagcaaccgaggccgt
cagccgcttacgggatccctcgaattcggcggtcggctgttcgggaatgcgggtgtcgcg
ttcattacgcgccaagtctatgatgaggcggcggcacatccgtttcgtcgcatcgaatcg
caacttatttacgacgacgtgacgcggctcattagaatcaccgcaggtgatcttcgcaat
cgcggaacgaatctccaagccttgccgcgtatggcaggtctttcagtcgaacggttttac
gggctggaaccgacacgtgtgtttcgcccgatcgggcagacgacgttcgatctcgagcgc
ccgtcgactgttcaagtgcgcgtcaacggtcttgttttccaagaactctatctcaacagc
ggtcgatatgatctccgggatcttcccctcaaccaggggtcgaacgcgatcgaactcgta
attcgcgatgacacaggtcgcgagcaaatcatttcacagaataatttcttcgatttcgat
ttgctggctacgggcgagacggacttttcagcagccgccggggtccgctccgatgcacct
gacggggttattcgctactccaatgactggatattcagcggcttcgctcggcatggattt
tcggacacatttacggcaggattggacgctcaaggcgacaaggaaggggtcgccatcggc
gcgtcagcaatctgggcctctcctatcgggacgtggcgcctgcaggctagcgggagtgag
cgtaaagagatcggcttcgggtatgcggcgggtgcgggttattccagcaccggctatttt
ggcaaggactggcggtggtcgctgcgcgcggacgcccaatatgtcgacgacaagttcgcg
accatcggcgacattgcgctgttgaatggaaatacgatcgaccgggcggcgcggacccgc
atatcggcgaacgctcaaatcaatagctcacgtttgtcattcaatttatcgggcgattac
gaaaagattcaaggcgagggtacgcgcacgacagcacttgccggggtgaactatacagtc
aattcgaccttggcagtgggcgtgttcgggcgtcatgtgaaggcgccgggacaatcgaac
accgggtttttcttccaactcaactggacgccgggcagaaatcgcctcgttcgtgcgacc
tatgacacggcgcgccgcgaagtcgatttgaattatcgatattcgccgcagccatatgtt
ggcacgacaggttacgagattggtctgcgccgcagcggcgaaatcgataccgccgaacta
agcggccgggtggcacatatatccaatcgattcgaagcgactgcccagcatagtgtattg
tcgaccgccaatttcgatggcgatgaacgtattcagattagccgcgcaacggtggcatcg
agcctcgttctagccggaggcaaggtgtccttgtcacgtcctgtgcgagaggcttttgcg
attgtttcgcggcatcccactctggcgaaaaaccagatactgattgatcgaacagaaaat
ggcgtgcgggcgcaaagcgacggttttggcccggcggtcgttcccgatttgccgacttac
atccggacttcaacctatgtggacgtcgagaatcttcctcctggctacgatttggggtcg
ggccaattcggctttaaggcaccgctatatgcagggtattccgtggaagcgggctcggcc
gcttcggtctcgatgatcggttcagtcgttaacaaggcaggtgaacctctgagctttatc
gccggacaaatgcagcgcaaagatcgaccggccgatgaaccgatccctgtgttcaccaat
cgtgcgggacgtctcgtgggtattggcttaacgccgggagtttacgtgctaacacttcgg
acagatccgcaataccaacaggatatcacgatcgacggaaacgggagcaccctcgttaac
atcggtgagataagggtagatcaacgatga
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