Sphingopyxis granuli: SGRAN_1481
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Entry
SGRAN_1481 CDS
T04372
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi00470
D-Amino acid metabolism
sgi00550
Peptidoglycan biosynthesis
sgi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SGRAN_1481 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SGRAN_1481 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgi01011
]
SGRAN_1481 (murD)
Enzymes [BR:
sgi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SGRAN_1481 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sgi01011
]
Precursor biosynthesis
Amino acid ligase
SGRAN_1481 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
AMG73868
UniProt:
A0AA86L2X6
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Position
1612107..1613423
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AA seq
438 aa
AA seq
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MIAARAFAGRRYAVLGLARSGLATVEALIAGGAGVTAWDDRADARDAAMALGADIGDPLT
IDLAGFAGVVVSPGVPLNRHPIADHARAAHVPVIGDIELFAEARADLPPHKVVGITGTNG
KSTVTALITHMLQTAGIPALMGGNIGLPILTRDPLPPNENGVGVYVLELSSYQIDLTHSL
ACDVAVLSNITPDHLDRYDGFESYAASKARLFALQTPDQVAVIAVDDDPSRMIAGRVAHR
LHRVSAKDIDPADQARWPALQGPHNAQNAVCAIAVCRVLGLNDEQIERGLATYTALPHRM
EWVGEARGARWYNDSKATNAASAAPALAAFPPAPDQRLHWIAGGRAKGDGLAACRPWFGN
VRRAYLIGEAMDPFAAEIGDAIAVERSGDLATAVAQAAAAVRPGDVVLLSPACASFDQFG
DYEQRGDAFRAAVLALGE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgcgcgcgccttcgccggccgccgttatgcggtgctcgggctggcgcgctcg
ggcctcgccacggtcgaagcgctgatcgccggcggcgcgggcgtcaccgcgtgggacgac
cgcgccgacgcgcgcgacgcggcgatggcgctcggcgccgacatcggcgatccgctgacg
atcgacctcgccggtttcgcgggcgtcgtggtctcgccgggggtgccgctcaaccgccat
ccgatcgccgaccatgcgcgcgcggcgcacgtgccggtcatcggcgacatcgaactgttc
gcggaggcgcgcgccgacctgcccccgcacaaggtcgtcggcatcaccggcaccaacggc
aagtcgaccgtcaccgcgctgattacccatatgctgcagacggcgggaatcccggcgctg
atgggcggcaacatcggcctgccgatcctgacgcgcgatccgttgccgccaaatgaaaac
ggcgtcggcgtctatgtgctggaactgtcgagctatcagatcgacctgacccacagcctc
gcctgcgacgtggccgtgctgtccaacatcacgcccgaccatctcgaccgctacgacggc
ttcgaaagctatgccgcctcgaaggcgcgcctcttcgcgctccagacccccgatcaggtc
gcggtgatcgcggtcgacgacgatccgtcgcgaatgatcgcggggcgcgtcgcgcatcgg
ctccaccgcgtgtcggcaaaggacatcgaccccgccgaccaggcgcgctggcccgcgctg
cagggaccgcacaacgcacagaacgccgtctgcgcgatcgcggtatgccgcgtgctgggg
ctgaacgacgaacagatcgagcgcgggctcgcgacctacaccgcgctcccgcatcgcatg
gaatgggtcggcgaagcccgtggcgcccgctggtacaacgacagcaaggcgaccaacgcg
gcttccgctgcaccggcgctggcggcctttccgccggcgccggaccagcgtctgcactgg
attgccggggggcgggcgaagggcgacggacttgccgcctgccgtccgtggttcggcaac
gtccggcgcgcctatctgatcggcgaggcgatggacccgttcgcggccgagatcggcgac
gccatcgcggtcgaacggtcgggcgacctcgcgaccgccgtcgcgcaggccgctgccgcc
gtccgtccgggcgacgtcgtgctgctgtcgcccgcctgcgcctccttcgaccagttcggg
gattatgagcagcgcggcgacgcgttccgcgcggccgttttggcgcttggcgaatga
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