Sphingopyxis granuli: SGRAN_1777
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Entry
SGRAN_1777 CDS
T04372
Name
(GenBank) Peptidoglycan binding domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgi01002
]
SGRAN_1777
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgi01011
]
SGRAN_1777
Peptidases and inhibitors [BR:
sgi01002
]
Cysteine peptidases
Family C82
SGRAN_1777
Peptidoglycan biosynthesis and degradation proteins [BR:
sgi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SGRAN_1777
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AMG74155
UniProt:
A0AA86L3Q2
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All DBs
Position
1944185..1945615
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AA seq
476 aa
AA seq
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MRKLMLAGSLLALALTGCGNPSANGDAQSNAAAATIRWNEAAVGQLRKAIERRAAHGLDH
MRFAVEGQVGSAEGEKALTQSALRYAAAVARGATDPAKLQDIYTIPRPEADLRPGLAGAL
SDGKLDDWIDSLAPQNDQYRKLSKAYLALRGSGDKAAAIPDTKPLKPGATDPRVPAIVAQ
LVASDYLDRAEGQGTLYTPAMVRAVQHMQIDYGIEPDGVIGGEALEILNLSDADRARALA
VAMERMRWLERTPPATRIDVNIAAGRLAYWRDGKLADTRKVVVGKPGKETPQLGSPIYRL
VANPTWTVPRSIQNGEIAKKGSAYLRRNDMAWKDGWIVQQPGPQNALGLVKFDMKNEHSI
YLHDTPAKSLFDEVQRQRSHGCVRVEDALGFAQMLARDEGILDEWQKARATGKESFVDLP
RAIPVRLYYQTVLFDDAGEPVVRADPYGWNDAVAAALGFPERQGFRLRASGDDIGP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaaattgatgttggccggctcgctgctggcgctggcgctgaccggatgcggcaat
ccttcggcgaacggcgatgcgcaatcgaacgcggcggcggccaccatccgctggaacgag
gcggcggtcgggcagttgcgcaaagctatcgaacggcgcgcggcgcacggtctcgaccat
atgcgcttcgcggtcgagggacaggtgggaagcgccgagggcgaaaaggcgttgacccaa
agcgcactccgctacgccgcggcggtcgcgcgcggtgcgaccgatcccgccaaattgcag
gatatctatacgatcccccgtcccgaagccgatctgcggcccggtctggccggggcgctg
tccgatggaaagctggatgattggatcgacagtcttgctccgcaaaacgaccagtatcgc
aagctttcgaaagcctatctcgcgctgcgggggtcgggggacaaggcggccgccatcccc
gataccaagccgctgaaacccggcgcgaccgatccccgcgtcccggccatcgtggcgcag
ctcgtcgcgtccgactatctcgaccgcgcagaggggcaggggaccctgtacacgccggcg
atggtccgtgccgtccagcatatgcagatcgattacggcatcgagcccgacggggtgatc
ggcggcgaggcgctcgaaatcctcaacctgtccgatgccgaccgggcccgcgcgctcgcg
gtcgcgatggaacgcatgcgctggctcgaacggacgccgcccgcgacgcgtatcgacgtc
aatatcgccgcggggcggctggcctattggcgcgatggaaagctggccgatacgcgcaag
gtggtcgtgggaaaaccggggaaggaaacgccccagctcggatcgccgatctaccggctc
gtcgccaatccgacctggacggtgccgcgctcgatccagaacggggagatcgcgaagaag
ggatcggcctatctacgccgcaacgacatggcgtggaaggacggctggatcgtgcaacag
ccggggccgcagaatgcgctggggctggtcaagttcgacatgaagaacgagcattcgatc
tatctgcacgacacccccgcaaaatcgctgttcgacgaggtgcagcgacagcgcagccac
ggctgcgtccgggtcgaggacgcgctcggcttcgcgcagatgctggcgcgcgacgagggt
atcctcgacgaatggcagaaggcgcgcgcgacggggaaggaaagctttgtcgacctgccc
cgtgcgataccggtaaggctctattaccagaccgtgctgttcgacgatgcgggcgagccg
gtcgttcgcgccgatccctatggctggaacgacgccgtcgccgcggcgcttggatttccc
gaaaggcagggcttcagattgcgcgcctccggcgacgatatcgggccgtga
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