Sphingopyxis granuli: SGRAN_1976
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Entry
SGRAN_1976 CDS
T04372
Symbol
speF
Name
(GenBank) Decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi00330
Arginine and proline metabolism
sgi00480
Glutathione metabolism
sgi01100
Metabolic pathways
sgi01110
Biosynthesis of secondary metabolites
sgi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SGRAN_1976 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SGRAN_1976 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SGRAN_1976 (speF)
Enzymes [BR:
sgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SGRAN_1976 (speF)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AMG74353
UniProt:
A0AA86GKI3
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Position
complement(2151853..2153043)
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AA seq
396 aa
AA seq
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MHQHHSAHGLIQALSPIEPVTLVRPHAARRAARFFIERFPGTTMYAVKANPSPDLLRLLW
DSGVTHYDVASIAEVRLVARTLPRATLCFMHPVKAEEAIAEAYWQHGVRTFSLDTMEELE
KIVRATRNAADLNLLVRLRVSSDHSKLSLAAKFGAEPDEVAELLMATRQAADALGICFHV
GSQAMTPHAYAQAMERVRAAIVAASVTVDIVDVGGGFPSSYPGMEPPPLDAYFDTIHRSF
ESLPISYSAELWCEPGRALSAEYSSLIVRVEKRRGDELYINDGAYGALFDAAHVGWRFPV
TLLRDAASEELAAFSFYGPTCDDLDHMAGPFYLPADVKPGDFIEIGMLGAYGCAMRTKFN
GFGAEEIHVVSDEPMTSLYTGEVEPERRTATVTKLF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ttgcaccagcatcatagcgcccacgggctgattcaggcactttcgccgatcgaacctgtc
acgcttgtccgcccgcacgccgcgcggcgtgcggcacggtttttcatcgagcgatttccc
ggcacgaccatgtatgcggtcaaggcgaatccgtcgcccgacctgctgcgcctgctgtgg
gattcgggtgtcacccactatgacgtcgcctcgatcgccgaggtgcggctggtggcgcgc
accctgccgcgggcgacgctctgcttcatgcacccggtgaaggccgaggaagcgatcgcc
gaagcctattggcagcacggcgtccgcaccttctcgctcgacacgatggaagagcttgag
aagatcgtccgcgcgacccgaaacgcggccgacctcaacctgctcgtgcgcctgcgcgta
tcgtccgaccattcgaagctgagcctcgccgccaagttcggcgccgagcccgacgaggtc
gccgaactgctgatggcgacccgccaggccgccgacgcgctcggcatctgcttccatgtc
ggcagccaggcgatgaccccgcacgcctatgcgcaggcgatggagcgcgtccgcgccgcg
atcgtcgcggcgtcggtcaccgtcgacatcgtcgatgtcggcggcggcttcccgtcgagc
tatcccggcatggagccgcccccgctcgatgcctatttcgacacgatccaccgcagcttc
gaaagcctgccgatcagctattcggccgaactgtggtgcgagcccggtcgcgcgctgtcc
gccgaatacagctcgctgatcgtgcgggtcgaaaagcgccgcggcgacgagctctacatc
aacgatggcgcctatggcgcgctgttcgacgccgcgcatgtcggctggcgctttccggtc
acgctgctgcgcgatgcggcgagcgaggaactggcggcgttcagcttctatgggccgacc
tgcgacgacctcgaccatatggcgggccccttctacctgccggccgacgtcaagccgggc
gatttcatcgagatcggcatgctcggcgcctatggctgcgcgatgcggacgaagttcaac
ggtttcggagccgaggaaatccacgtcgtcagcgacgagccgatgactagcctctacacc
ggcgaagtcgaacccgaacgccgcacggcaacggtgacgaagctgttctga
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