Sphingopyxis granuli: SGRAN_1996
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Entry
SGRAN_1996 CDS
T04372
Symbol
rnc
Name
(GenBank) RNase III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgi03019
]
SGRAN_1996 (rnc)
03009 Ribosome biogenesis [BR:
sgi03009
]
SGRAN_1996 (rnc)
03036 Chromosome and associated proteins [BR:
sgi03036
]
SGRAN_1996 (rnc)
Enzymes [BR:
sgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SGRAN_1996 (rnc)
Messenger RNA biogenesis [BR:
sgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SGRAN_1996 (rnc)
Ribosome biogenesis [BR:
sgi03009
]
Eukaryotic type
90S particles
RNase
SGRAN_1996 (rnc)
Prokaryotic type
rRNA processing factors
SGRAN_1996 (rnc)
Chromosome and associated proteins [BR:
sgi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SGRAN_1996 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AMG74373
UniProt:
A0AA86GNT4
LinkDB
All DBs
Position
complement(2174372..2175055)
Genome browser
AA seq
227 aa
AA seq
DB search
MSEGASAETIAAITGAPPGDLGLYHRALTHGSSGAGDYQRLEFLGDRVLGLVIASELFRR
FPKASEGELSSRLHALASGETCARIAQRLDLNAHVRFGAQAISDGGRQSDNVAADVLEAL
IGALWLDRGEAAARAFIVREWGAMIEGQTAAPKHPKAALQEWALARKRRPPEYRLVRREG
PDHAPRFRVAVAIGKLAEAEGEGASKQAAEKAAAAALLDRLTQEEKQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaaggcgcgtccgccgaaaccatcgccgcgatcaccggcgcgccgcccggcgac
cttggcctttatcaccgcgcgctgacccatggcagcagcggcgcgggcgattatcagcgg
ctcgaattcctgggcgaccgggtgctggggctggtgatcgcatccgagctgttccgccgg
tttccgaaggcgagcgagggtgagctttcgtcgcgcctgcatgcgctggcgtcgggcgaa
acctgcgcgcgcatcgcgcagcggctcgacctcaacgcgcatgtccgcttcggcgcgcag
gcgatcagcgacggcgggcggcagagcgacaatgtcgccgccgacgtgctcgaagcgctg
atcggcgcgctgtggctcgaccggggcgaggcagcggcgcgcgccttcatcgtccgcgaa
tggggcgcgatgatcgaggggcagaccgcggcgcccaagcatccaaaggcggcgctccag
gaatgggcgctcgcccgcaagcgccgtccgcccgaatatcgcctcgtccgccgcgaaggc
cccgaccatgcgccgcgctttcgcgtcgcggtcgcgatcggcaagctggccgaggccgaa
ggcgaaggcgcatcgaaacaggcggccgagaaggccgcagcggccgccctgctcgaccgg
ctgacacaggaagagaaacaatga
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