Sphingopyxis granuli: SGRAN_2008
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Entry
SGRAN_2008 CDS
T04372
Symbol
accC2
Name
(GenBank) Biotin carboxylase
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi00280
Valine, leucine and isoleucine degradation
sgi00630
Glyoxylate and dicarboxylate metabolism
sgi00640
Propanoate metabolism
sgi01100
Metabolic pathways
sgi01110
Biosynthesis of secondary metabolites
sgi01120
Microbial metabolism in diverse environments
sgi01200
Carbon metabolism
Module
sgi_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SGRAN_2008 (accC2)
00640 Propanoate metabolism
SGRAN_2008 (accC2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SGRAN_2008 (accC2)
Enzymes [BR:
sgi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
SGRAN_2008 (accC2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATP-grasp_3
ATP-grasp_5
DUF2118
RnfC_N
ATPgrasp_ST
GCV_H
Motif
Other DBs
NCBI-ProteinID:
AMG74385
UniProt:
A0AA86GK17
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Position
2188828..2190849
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AA seq
673 aa
AA seq
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MFKKILIANRGEIACRVIKTARRMGIATVAVYSDADARAPFVRMADEAVHIGPSPASESY
LIADRIIEACKATGAEAVHPGYGFLSERTSFAEALAKENIAFIGPPVNAIAAMGDKIESK
KLAKEAGVNVVPGFVGEIRDTEHAVEISNEIGYPVMMKASAGGGGKGMRLAYDEKDVREG
FESVKREGLNSFGDDRVFIEKFILNPRHIEIQILGDQHGNILYLNERECSIQRRHQKVVE
EAPSPFVTPKMRKAMGEQCVALSKAVGYYSAGTVELIVSGADPTGESFYFLEMNTRLQVE
HPVTETITGIDLVEQMIRVAAGEKLELTQDDVKIDGWAIENRVYAEDPYRGFLPSTGRLT
RYRPPVPGWTDDGAENGRRGVDGVRVDDGVYDGGEVSIFYDPMIAKLITWGKTRDEAADL
QVAALDRFELEGLGHNIDFVSAIMQHPRFRSGELTTGFIAEEYPEGFHGAPADEAVTRAL
AAIAGFMASAEADRARRVDGQLGDRLDPPARWQVTIGDASHKVKLGRKHIKVDGEKVDIA
LEYTPGDRLVVAEIDGSELAVKVAKTRTGWRMTTRGAIHDVRVLPWHVAPLSAHMIEKVP
PDLSKFLICPMPGLLVALHVGAGDKVEAGQPLATVEAMKMENILRAEKTGVVKSVNAAQG
DSLAVDAVILEME
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaagaaaatcctgatcgccaaccgcggcgaaattgcctgccgcgtcatcaagacc
gcgcgccgcatgggcattgcgaccgttgccgtctattcggacgccgacgcgcgcgcgccg
ttcgtgcggatggccgacgaggcggtgcacatcggcccgtcgcctgcatccgaatcctac
ctgatcgccgacaggatcatcgaagcgtgcaaggcgacgggcgcagaggcggtgcatccg
ggctatggcttcctgtccgaacgcaccagcttcgccgaggcgctggccaaggaaaacatc
gccttcatcggcccgccggtgaacgcgatcgccgcgatgggcgacaagatcgagtcgaag
aagctcgccaaggaagcgggcgtcaacgtcgtccccggcttcgtcggcgaaatccgcgac
accgagcatgcggtcgagatttcgaacgagatcggctatccggtgatgatgaaggcctcg
gcgggcggcggcggcaaggggatgcgcctcgcctatgacgagaaggacgtccgcgagggc
ttcgagagcgtcaagcgcgaggggctcaacagcttcggcgacgaccgcgtcttcatcgag
aagttcatcctcaacccgcgccatatcgagatccagatcctcggcgaccagcacggcaac
atcctctatctgaacgagcgcgaatgctcgatccagcgccgccaccagaaagtggtcgaa
gaggcgccgtcgcccttcgtcacgcccaagatgcgcaaggcgatgggtgaacagtgcgtc
gcgctgtcgaaggcggtcggctattacagcgcgggcacggtcgagctgatcgtctcgggt
gccgacccgacgggcgagagcttctatttcctcgaaatgaacacccggcttcaggtcgag
catccggtgaccgagacgatcaccggcatcgacctggtcgaacagatgatccgcgtcgcg
gcgggcgagaagcttgaactgacgcaggacgatgtgaagatcgacggctgggcgatcgag
aaccgcgtctatgccgaggacccgtatcgcggtttcctgccctcgaccgggcggctgacg
cgctacaggccgccggtgccgggctggaccgacgacggcgcggagaatggccgccgcggc
gtcgacggcgtgcgcgtcgacgacggcgtctatgacggcggcgaggtgtcgatcttctac
gacccgatgatcgccaagctgatcacctggggcaagacgcgcgacgaggccgccgatctg
caggtcgcggcgctcgaccgcttcgagctcgaagggctcggccacaatatcgatttcgtc
tcggcgatcatgcagcatccgcgcttccgctcgggcgaactgacgacgggcttcatcgcc
gaggaatatccggaagggttccacggcgcgcccgccgacgaagcggtgacgcgcgcgctg
gcggcaatcgcgggcttcatggcgagcgccgaggccgatcgcgcgcggcgcgtcgacggt
cagctcggcgaccggctcgacccgcccgccaggtggcaggtgacgatcggcgacgcgagc
cacaaggtgaagctcggccgcaagcatatcaaggtcgacggcgaaaaggtcgacatcgcg
ctcgaatatacgccgggcgaccggctggtcgtcgcggagatcgacggcagcgaactcgcg
gtgaaggtggcgaagacgcgcaccggctggcgcatgacgacgcgcggggcgatccatgac
gtgcgggtactgccgtggcatgtcgcaccgctgtcggcgcacatgatcgagaaggtcccg
cccgacctgtcgaaattcctcatctgcccgatgccgggcctgctcgtcgcgctgcacgtc
ggcgccggcgacaaggtcgaggcaggccagccgctcgcgacggtcgaggcgatgaagatg
gagaatatcctgcgtgccgaaaagaccggcgtggtgaaaagcgtcaacgccgcgcagggc
gacagcctggcggtcgatgcggtgatactggagatggaatag
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