Sphingopyxis granuli: SGRAN_2295
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Entry
SGRAN_2295 CDS
T04372
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
Organism
sgi
Sphingopyxis granuli
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
Helicase_C_4
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AMG74660
UniProt:
A0AA86GM79
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Position
complement(2492690..2494075)
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AA seq
461 aa
AA seq
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MKFADLGLSDELLRAVTEAGYDEPTPIQAGAIPSVLMMRDMIGIAQTGTGKTASFVLPMI
DILAQGRARALMPRSLILEPTRELAAQVAENFENYGRYHKLSMALLIGGVQMGDQIKALE
KGVDVLIATPGRLMDLFERGKILLTGCNMLVIDEADRMLDMGFIPDIENICTKLPTNRQT
LLFSATMPPPIKKLADKFLSNPKTIEVARPASTNVNIAQFLVKTSERAKRDTLRDLIEEE
GVATAIIFCNRKTTVRELAKSLKRHRYRAGEIHGDMDQSSRIAELDRFKNGDINILVASD
VAARGLDVKGVSHVFNFDAPWHPDDYVHRIGRTGRAGAKGRAFTLVTPSDDEAIDNIQKL
TGSKIAILGRPESAGERKEETQPARDGKRREEGRREEGRREEERKPRAKRGEAKPRNGDG
HAAKKDAGRKPAPAATRRDDDGPDDGWNGPMPDFLSVGFGT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgccgacctcggcctctccgatgaacttttgcgcgctgtcaccgaagcgggc
tatgacgaaccgacaccgattcaggcgggagcgatcccgtcggtcctgatgatgcgcgac
atgatcggcatcgcccagacggggaccggcaagaccgcctctttcgtgctgccgatgatc
gacatcctcgcgcagggccgtgcccgcgcgctgatgccgcgctcgctgatcctcgaaccg
acgcgcgagcttgccgcgcaggtggccgagaatttcgagaattacggccggtatcacaag
ctttcgatggcgctgctgatcggcggcgtgcagatgggcgatcagatcaaggcgctcgaa
aagggcgtcgacgtgctgatcgcgacgccgggccgcctgatggacctgttcgagcgcggc
aagatcctgctcaccggctgcaacatgctcgtcatcgacgaggcggaccggatgctcgac
atgggcttcatccccgacatcgagaatatctgcaccaagctgccgacgaatcgccagacc
ctgctcttctccgcgacgatgccgccgccgatcaagaagcttgccgacaaattcctgtcg
aatcccaagacgatcgaggtggcgcggcccgcgagcaccaacgtgaacatcgcccagttc
ctcgtcaagaccagcgaacgcgccaagcgcgatacgctgcgcgacctgatcgaggaagag
ggcgtcgccaccgcgatcatcttctgcaaccgcaagacgacggtgcgcgagctcgccaag
tcgctgaagcggcaccgctatcgcgcgggcgagattcacggcgacatggatcagtcgagc
cgcatcgccgaactcgaccgtttcaagaacggcgacatcaacatcctcgtcgcgtcggac
gtcgcggcgcgcgggctcgacgtcaagggcgtcagccacgtcttcaacttcgacgcgccc
tggcatcccgacgattatgtccatcgcatcggccgcaccggccgcgccggggcgaaaggc
cgtgccttcacgctggtgacgccgtcggacgacgaggcgatcgacaatatccagaagctg
accggctcgaagatcgcgatcctcggacgccccgaaagcgccggcgagcgcaaggaagaa
acgcagcccgcgcgcgacggtaaacgacgcgaagaggggcgccgtgaagaaggacgccgc
gaagaggagcgcaagccccgggcaaagcgcggcgaggcgaaacccagaaacggcgacggc
catgccgcaaagaaggacgcaggccgaaagcccgctcccgcggcgactcgtcgcgacgac
gatggtcccgacgacggctggaacggcccgatgccggacttcctctcggtcggcttcggc
acctga
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