Sphingopyxis granuli: SGRAN_2334
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Entry
SGRAN_2334 CDS
T04372
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGRAN_2334 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgi03019
]
SGRAN_2334 (rppH)
Messenger RNA biogenesis [BR:
sgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SGRAN_2334 (rppH)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AMG74698
UniProt:
A0AA86GL16
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All DBs
Position
2536586..2537062
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AA seq
158 aa
AA seq
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MSDAGALPYRPCAGVMLANRTGRIFVGQRIDSSADAWQMPQGGIDPGEDAEAAALRELEE
ETGVHAGLVDIIARSRTEHLYDLPDDLIGTVWGGRYRGQRQNWFLMRFMGEDADVHIVTP
HQEFRAWRWAELDELERLIVPFKRALYRAVVEEFRPLV
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccggcgccctgccctatcgcccctgcgcgggggtgatgctggccaatcgg
accggccgcatcttcgtcggccagcggatcgattcgagcgccgacgcctggcagatgccg
cagggcggcatcgaccccggcgaggatgccgaagccgcggcgctgcgcgagctcgaggag
gaaacgggcgtccacgcggggctggtcgacatcatcgcgcgcagccggaccgagcatctc
tacgaccttcccgacgatctgatcggcacggtgtggggcggccgctatcgcgggcagcgc
cagaactggttcctgatgcgcttcatgggcgaggatgccgacgtccatatcgtcaccccc
catcaggaattccgcgcgtggcgctgggccgagctcgacgagctcgaaaggctgatcgtc
ccgttcaagcgcgcgctctatcgcgccgtggtcgaggagttccgcccgctcgtttag
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