Sphingopyxis granuli: SGRAN_2430
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Entry
SGRAN_2430 CDS
T04372
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03030
DNA replication
sgi03430
Mismatch repair
sgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGRAN_2430 (dnaX)
03430 Mismatch repair
SGRAN_2430 (dnaX)
03440 Homologous recombination
SGRAN_2430 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgi03032
]
SGRAN_2430 (dnaX)
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_2430 (dnaX)
Enzymes [BR:
sgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGRAN_2430 (dnaX)
DNA replication proteins [BR:
sgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGRAN_2430 (dnaX)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGRAN_2430 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
RuvB_N
AAA_22
AAA_16
AAA_30
AAA_14
AAA_24
AAA_19
PIF1
Glyco_tranf_2_5
AAA_assoc_2
AAA_2
AAA_18
DUF815
Motif
Other DBs
NCBI-ProteinID:
AMG74792
UniProt:
A0AA86GNT7
LinkDB
All DBs
Position
complement(2641154..2642860)
Genome browser
AA seq
568 aa
AA seq
DB search
MSDSADDEPAMPGMDLPETPAQPAAQAGPYRVLARKYRPQTFAELIGQDAMVRTLGNAIA
RDRLAHAFLMTGVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGVCEPCRAITEGRHI
DVIEMDAASNTGVDDVREIIEAVRYAAVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPP
HVKFLFATTEVNKVPVTVLSRCQRFDLRRITPDMLFAHFSAILQKEGVEAEAPAIWLIAN
AAEGSVRDGLSILDQAIAHADLESGGGGGRIAAEQVRTMLGLSDRSTIAQLMAAILEGDA
GGAIDLARAQYALGIEPVAMVRGLMDLTHAVTLAKVSRHEDPALSDDDRARIGDWAQKLG
FAPLNRLWQLLLKGHEEVLRANNPLEHLEMLLLRVIYAASLPDPGELAKRIEAGGASALS
APPSPGPAAAGPESAAVAPTETPVAALTIRQIHHLLDSSGHQQLARQVHDEVRVIELEPG
LLVFAAVPTLDGDFARRLGEVLRAQTGSHWQVRAGEGEARPSLKDVAEAKSADNDARIRE
LPVVKAALAAFPDARLVEDEHHQQRFQS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccgccgacgacgaacccgcgatgccgggaatggacctgcccgaaacgccg
gcgcagcccgccgcgcaggccgggccttaccgcgtccttgcgcgcaaatatcggccgcag
acatttgccgaactgatcggccaggacgcgatggtccgcacgctcggcaatgcgatcgcc
cgcgatcggctcgcgcatgctttcctgatgaccggggtgcgcggtgtcggcaagacctcg
accgcgcggctgatcgccaaggcgctcaactgcatcggtcccgacgggcagggcgggccg
acgatcgatccgtgcggcgtctgcgaaccgtgccgcgcgatcaccgaaggccgccatatc
gacgtgatcgagatggatgccgcgtcgaacaccggcgtcgacgacgtgcgcgagatcatc
gaggcggtgcgctatgccgccgtgtcggcacgctacaagatctacatcatcgacgaagtg
cacatgctgtcgcgcaacgccttcaacgcgctgctgaaaacgcttgaggaaccgccgccg
cacgtcaagttcctgttcgcgacgacagaggtcaacaaggtgccggtgacggtgctgtcg
cgctgccagcgcttcgacctccgccgcatcacccccgacatgctgttcgcgcatttcagc
gccatcctccagaaggaaggggtggaggcggaggcgccggcgatctggctgatcgccaat
gcggccgagggttcggtgcgcgacgggctgtcgatcctcgatcaggcgatcgcgcacgcc
gatctcgaatccggcggcggcggtggccggatcgccgccgagcaggtgcgtacgatgctc
ggcctgtcggatcgctcgacgatcgcgcaactcatggcggcgatcctggagggcgatgcg
ggcggcgcgatcgacctcgcccgcgcccaatatgcgctggggatcgagcccgtcgcgatg
gtgcgcggactgatggaccttacgcatgccgtcacccttgccaaggtgtcgcgccacgag
gacccggcgctgtcggacgatgaccgcgcgcgcatcggcgactgggcgcagaagctgggc
ttcgcgccgctgaaccgcctctggcagctcctgctcaaggggcatgaggaggtgctgcgc
gcgaataatccgctcgaacatctcgaaatgctgctgctgcgcgtcatctacgccgcctcg
ctgcccgatccgggcgagcttgcgaagcgcatcgaggcgggcggtgcgtccgccctgtcg
gcgcccccttcgccgggtcccgcggcggccggaccggagagcgcggcagtggcgcccacc
gagactccggtggcggcgctcaccatccggcagattcatcatcttctcgacagcagcggg
caccagcagctcgcacggcaggtccatgacgaggtgcgcgtgatcgagctggagcccggg
ctgctggtgttcgccgcggtcccgacgctcgacggcgatttcgcgcgccggctgggggag
gtgttgcgcgcgcagacgggcagtcattggcaggtgcgcgccggcgaaggcgaggcgcgc
ccgagcctgaaggacgtggcggaagcgaagagcgccgacaatgacgcgcggattcgcgaa
ctgccggtcgtgaaggccgccctggcggcttttcccgacgcaaggcttgtcgaggacgag
catcatcagcaaaggttccagtcatga
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