Sphingopyxis granuli: SGRAN_2438
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Entry
SGRAN_2438 CDS
T04372
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi00260
Glycine, serine and threonine metabolism
sgi00460
Cyanoamino acid metabolism
sgi00630
Glyoxylate and dicarboxylate metabolism
sgi00670
One carbon pool by folate
sgi00680
Methane metabolism
sgi01100
Metabolic pathways
sgi01110
Biosynthesis of secondary metabolites
sgi01120
Microbial metabolism in diverse environments
sgi01200
Carbon metabolism
sgi01230
Biosynthesis of amino acids
sgi01240
Biosynthesis of cofactors
sgi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SGRAN_2438 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SGRAN_2438 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SGRAN_2438 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SGRAN_2438 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SGRAN_2438 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SGRAN_2438 (glyA)
Enzymes [BR:
sgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SGRAN_2438 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AMG74799
UniProt:
A0AA86L369
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All DBs
Position
2646696..2648003
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AA seq
435 aa
AA seq
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MTTDTLDKPIKSAGYFTDGVGTTDPAVAAAMQHELERERYQIELIASENIVSKAVLEAQG
SVFTNKYAEGYPGRRYYQGCGPSDEVETLAIDRAKQLFDCNFANVQPHSGAQANGAVMLA
LTKPGATILGMSLDAGGHLTHGAAPALSGKWFNAIQYGVRADDHLVDFDQVERLAKEHRP
ALIIAGGSAYPRTLDFARFRAIADDVGALLMVDMAHFAGLVAGGAHPSPMEHAHVVTTTT
HKTLRGPRGGMVLTNDEAIAKRINSAVFPGLQGGPLVHVIAAKAVAFGEALRPEFKTYAR
ATIANAQALANRLKARGADIVAGGTDTHLALIDLRPLGITGRDADEALERSAITCNKNGV
PFDPLPPVKTSGIRVGSPAGTTRGFGIAEFEAIGDMVADVLEALRDKGEQGDADVEADVR
ARVRALCERFPIYQG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagatacgctcgacaagcccatcaaatcggccggttatttcaccgacggcgtc
ggcacgaccgaccccgcggtcgcggcggcgatgcagcatgagctggaacgcgaacgctat
cagatcgaactgatcgcgtccgagaacatcgtttccaaggcggtgctcgaggcgcaggga
tcggtcttcaccaacaaatatgccgaaggctatccgggccgccgctattatcagggctgc
ggtccgtcggacgaggtcgagacgctggcgatcgaccgcgcgaagcagcttttcgactgc
aatttcgccaacgtccagccgcattcgggcgcgcaagcgaacggtgcggtgatgctggcg
ctgaccaagccgggcgcgacgatcctcggcatgagcctcgacgccggcggccacctgacg
cacggcgccgcgccggcgctgtccggcaaatggtttaacgccatccaatatggcgtgcgc
gccgacgatcatctcgtcgatttcgaccaggtcgaacgccttgccaaggagcatcggccg
gcgctgatcatcgcgggcggttcggcctatccgcgcacgctcgacttcgcgcgcttccgc
gccatcgccgacgatgtcggcgcgctgctgatggtcgacatggcgcatttcgcgggcctc
gtcgcgggcggcgcgcacccgtcgccgatggaacatgcgcatgtcgtcaccacgacgacg
cacaagacgctgcgcggcccgcgcggcggcatggtgctgaccaatgacgaagcgatcgcg
aagcggatcaactcggcggtcttccccggcctgcagggcggtccgctggtgcatgtcatc
gccgcgaaggcggtcgccttcggcgaagcgctgcgccccgagttcaagacctatgccagg
gcgacgatcgccaacgcgcaggcgctggcgaaccggctgaaggcgcggggcgccgatatc
gtcgcgggcggcaccgacacgcacctcgcgctgatcgacctgcgcccgctcggcatcacc
ggccgcgacgcggacgaggcgctcgaacgcagcgcgatcacctgcaacaagaacggcgtc
cccttcgacccgctgccgccggtcaagaccagcggcatccgcgtcggatcgcccgccggc
acgacgcgcggcttcggcatcgccgaattcgaggcgatcggcgacatggtcgccgacgtg
ctcgaagcgctgcgcgacaagggcgagcagggcgacgccgatgtcgaggccgacgtccgc
gcgcgcgtccgcgccctgtgcgaacgcttccccatctatcagggatag
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