Sphingopyxis granuli: SGRAN_2808
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Entry
SGRAN_2808 CDS
T04372
Name
(GenBank) RNA polymerase
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgi03021
]
SGRAN_2808
Transcription machinery [BR:
sgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SGRAN_2808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_28
Sigma70_ECF
HTH_23
HTH_Tnp_ISL3
KORA
DUF134
HTH_29
GerE
FliO
HTH_1
HTH_psq
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AMG75157
UniProt:
A0AA86L4R3
LinkDB
All DBs
Position
complement(3052952..3053389)
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AA seq
145 aa
AA seq
DB search
MLGSGDEAQDALQNALASTWIARAKLDPSKPIAAYLTTVTLNKCRDRMRRRKAARLLGLG
AFDPDMPVASDAPGAESEIADRQALEEVSRAIERLPIRLREALVLVAIDGRSQREAAELL
GVTEKTIETRVYRARQRLREKLDFV
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggtcaggcgatgaggctcaggacgccctgcaaaatgcactcgcatcgacctgg
atcgcgcgcgccaaactggacccctcaaagccgattgcggcctacctgacgacggtgact
ctcaacaaatgccgggaccggatgcggagacgaaaggcggcaaggctcctcggcctcggt
gcgttcgatccggacatgccggtggcatccgacgcgcccggcgcggaatccgagattgcc
gatcggcaggcgctggaagaagtttcccgcgcgattgagcgcctgccgatccgtctgcgc
gaagcgctcgtcctagttgccatcgacggacgcagtcagcgggaggccgccgaacttctc
ggcgtaaccgagaaaacaatcgagacccgcgtttaccgcgcgaggcagcggctgcgcgag
aaactcgattttgtttga
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