KEGG   Sphingopyxis granuli: SGRAN_2808
Entry
SGRAN_2808        CDS       T04372                                 
Name
(GenBank) RNA polymerase
  KO
K24073  RNA polymerase sigma factor CnrH
Organism
sgi  Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:sgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgi03021]
    SGRAN_2808
Transcription machinery [BR:sgi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SGRAN_2808
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like HTH_28 Sigma70_ECF HTH_23 HTH_Tnp_ISL3 KORA DUF134 HTH_29 GerE FliO HTH_1 HTH_psq Xre-like-HTH
Other DBs
NCBI-ProteinID: AMG75157
UniProt: A0AA86L4R3
LinkDB
Position
complement(3052952..3053389)
AA seq 145 aa
MLGSGDEAQDALQNALASTWIARAKLDPSKPIAAYLTTVTLNKCRDRMRRRKAARLLGLG
AFDPDMPVASDAPGAESEIADRQALEEVSRAIERLPIRLREALVLVAIDGRSQREAAELL
GVTEKTIETRVYRARQRLREKLDFV
NT seq 438 nt   +upstreamnt  +downstreamnt
atgctcgggtcaggcgatgaggctcaggacgccctgcaaaatgcactcgcatcgacctgg
atcgcgcgcgccaaactggacccctcaaagccgattgcggcctacctgacgacggtgact
ctcaacaaatgccgggaccggatgcggagacgaaaggcggcaaggctcctcggcctcggt
gcgttcgatccggacatgccggtggcatccgacgcgcccggcgcggaatccgagattgcc
gatcggcaggcgctggaagaagtttcccgcgcgattgagcgcctgccgatccgtctgcgc
gaagcgctcgtcctagttgccatcgacggacgcagtcagcgggaggccgccgaacttctc
ggcgtaaccgagaaaacaatcgagacccgcgtttaccgcgcgaggcagcggctgcgcgag
aaactcgattttgtttga

DBGET integrated database retrieval system