KEGG   Sphingopyxis granuli: SGRAN_3430
Entry
SGRAN_3430        CDS       T04372                                 
Symbol
lcfA
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sgi  Sphingopyxis granuli
Pathway
sgi00061  Fatty acid biosynthesis
sgi00071  Fatty acid degradation
sgi01100  Metabolic pathways
sgi01212  Fatty acid metabolism
sgi02024  Quorum sensing
sgi04146  Peroxisome
Module
sgi_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sgi00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    SGRAN_3430 (lcfA)
   00071 Fatty acid degradation
    SGRAN_3430 (lcfA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    SGRAN_3430 (lcfA)
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SGRAN_3430 (lcfA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sgi01004]
    SGRAN_3430 (lcfA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sgi04147]
    SGRAN_3430 (lcfA)
Enzymes [BR:sgi01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     SGRAN_3430 (lcfA)
Lipid biosynthesis proteins [BR:sgi01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   SGRAN_3430 (lcfA)
Exosome [BR:sgi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   SGRAN_3430 (lcfA)
  Exosomal proteins of breast cancer cells
   SGRAN_3430 (lcfA)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_3
Other DBs
NCBI-ProteinID: AMG75773
UniProt: A0AA86L4S5
LinkDB
Position
3747153..3748820
AA seq 555 aa
MNTPFDWSQAYRHPTDWNQSFPPLSLPAMLAESVARKGDAPMLDFMGRRFSYAEVARGVA
RVARGLQQRGIGTGSRVGLFLPNVPHYVAAYYGALAAGATVVNFSPLYTVAELEAQVEDS
ATDTLFTVSAAALLPTALAVLDGSSLKRLVVGSVAGGLPAAKSVLYRLFRRRETAPLPDD
PRVIRFSALVDNDGRADPATIDPEQDIALIQYTGGTTGTPKGAMLTHQNLTANARQVNSI
DPDRDADDRILGVLPFFHVFANTAVLNRTVLNGGMIAMLPRFDAKQTLQAITRTKATALP
GVPTMYQALLDHPDLAKTDFSSLRVCISGGAPMPAELRDKFVAATGASLVEGYGLTESSG
VVSTNPYEGPVKAGTIGQPIPATHIRLLDKEDPTRDAPAGEPGELAVKGPQIMRGYWNRP
EADKDSFTADGWLRTGDVATIDADGYIRIVDRLKDMIAVGGFKVYPSEIEHKLYQHPAVK
EAIVLGVPDAYRGEVPKAFVTLEDGYEASGDALAAWLNPQLGKHERVSAVEVRESLPKTM
IGKLDRKALRAEAMG
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaataccccctttgactggtcgcaagcctatcgtcacccgaccgactggaaccagagc
tttccaccgctttcgctacccgcgatgctcgccgaaagcgtcgcgcgcaagggcgatgcg
ccgatgctcgatttcatggggcgccggttcagctatgccgaggtggcgcgcggcgtcgcc
cgcgtcgcgcgcggcctgcagcagcgcgggatcggcacgggcagccgcgtcggcctgttc
ctgcccaatgtcccgcactatgtcgctgcctattacggcgcgctcgcggcgggcgcgacg
gtggtcaatttctccccgctctacaccgtcgccgaactggaagcgcaggtcgaggattcg
gcgaccgacacgctgttcaccgtcagcgccgcggcgctgctgccgaccgcgctcgcggtg
ctggacggatcgagcctcaagcgactggtcgtcggatcggtggcgggcgggctgcccgcc
gccaagtcggtgctctatcggctgttccggcggcgggagaccgcgccgctgcccgacgat
ccgcgcgtgatccgcttttccgccctcgtcgacaacgacgggcgcgccgacccggcgacg
atagaccccgagcaggatatcgcgctgatccaatataccggcggcaccaccggcacgccc
aagggcgcgatgctgacgcaccagaatctgaccgccaacgcgcggcaggtgaacagcatc
gatcccgaccgcgacgccgacgaccgcatcctgggcgtgctgcccttcttccatgtcttc
gccaacaccgcggtgctcaaccgcaccgtgctcaacggcgggatgatcgcgatgctgccg
cgcttcgacgccaagcagacgttgcaggcgatcacgcggacgaaagcgaccgcgctgccc
ggcgtgccgacgatgtaccaggcgctgctcgaccaccccgacctggcgaagaccgatttt
tcatcgttgcgcgtctgcatctccggcggcgcgccgatgccggccgaactcagggacaag
ttcgtcgccgcgaccggcgcgtcgctggtcgaaggctatggcctcacagaaagctccggc
gtcgtctcgaccaacccctatgaaggcccggtcaaggccggcaccatcggtcagccgatc
cccgcgacgcacattcgcctgctcgacaaggaggacccgacgcgcgacgcccccgcgggc
gagccgggcgaactcgcggtcaaggggccgcagatcatgcgcggctactggaaccggccc
gaggccgacaaggacagcttcaccgccgacggctggctgcgcaccggcgacgtcgcgacg
atcgacgccgacggctatatccgcatcgtcgaccggctgaaggacatgatcgcggtcggc
ggcttcaaggtctatcccagcgagatcgagcacaagctctatcagcatcccgcggtcaag
gaggcgatcgtgctcggggtgcccgacgcctatcgcggcgaggtgcccaaggcgttcgtg
acgctggaggacggatatgaggcatcgggcgacgcgctcgccgcctggctcaacccccag
ctcggcaagcatgagcgggtaagcgcggtcgaggtgcgcgagagcctgcccaagacaatg
atcggcaagctcgacaggaaggcgctgcgcgcggaggccatggggtga

DBGET integrated database retrieval system