Sphingopyxis granuli: SGRAN_3463
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Entry
SGRAN_3463 CDS
T04372
Symbol
addB
Name
(GenBank) Helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_3463 (addB)
Enzymes [BR:
sgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SGRAN_3463 (addB)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SGRAN_3463 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AMG75806
UniProt:
A0AA86GPA0
LinkDB
All DBs
Position
complement(3789998..3792964)
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AA seq
988 aa
AA seq
DB search
MTRPAIFSIPIHRAFADALAAGLIARFADGALGLAEGLILLPSNRAKSAVQAAFVRAGGE
GLLMPRLAVIGDADLDESVALALDAIDEAEPLPPAIDPLRRRLLLAELIERHTPEGEAAI
TGAAAFQLADGLARVIDQLHYEERTVSALVDLDLGAFAGHWQASLARLRLLVDHWPGVLA
ATGSIDRAERRNRLLDRVREGWRKAPPARFVVAAGITTAAPAVARLLRTVAGMERGMVVL
PGLDPVMATEEWDALGPTRSDADDPARPLETHPQYHLKLLLDRMGASRDEVQAWDAVSDF
DGPEARTPFVSLLLAPAAYSAQWQAAGDLSAATVGLSGAVFADDGQEAQGIALLMREAIE
TPGRTAALVTPDRALAERVAAALTRWGIAVDDSAGQPLAQTPPGALLLLLAGLAADFDPV
ALVSLLGHPLVRKGEERAAWLDQVRRLDLLLREPGLTPGWAGVTARIAARAADPKARGHA
LAAALGPWWGELSEALGATLAPFAAGPTPPATLLGALQAGLERLTGDAVWTGPAGRMLAE
LFDAWALARGAGPARVDPADFPAMLGQLLAQASVRPPYGGHPRLFIWGLLEARLQRADLM
ILGGLDEGRWPAATQPDPWLAPGIRRLLGLPAPERQQGLAAHDFAGALGAREIVVTRAQR
SGGDPAVASRFWLRLSALAGDLAEPDPGGVPLTRLAAELDAPPGEPRPTPRPRPAPPLAD
RPRRIGVTALDRLARDPFAYYANQMLGLSPLDPLSAAPDPRWRGTRIHTLFEDWVRGGAT
REGFEAEIAALRIDPALDAIARAFWLPRIEPALRWAAEQVWSAEGRRPLAVEARGELTAD
GITLHGKADRIDRHDDGSLAIVDYKSGGAPSAKAAYDRLDNQLGLLGLIARAGGMEGIAA
APVASLEYWSLRPDRRAGGAGKISRTHGPRGGLKSAEEAIDHAAGALVDLAGRYLLGDAP
FAPGEVAGPGDYDQLMRRDEWFGRGEGE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggcccgccatcttctccatcccgattcatcgggctttcgccgacgcgctggcg
gcggggctgatcgcgcgcttcgccgacggggcgctcggccttgccgaaggattgatcctg
ctgccgagcaaccgcgcgaagagcgcggtgcaggcggcgttcgtgcgtgcgggcggggag
ggtctgctgatgccgcggctcgcggtgatcggcgacgccgacctcgacgagagcgtcgcg
ctggcgctcgacgcgatcgacgaggccgagccgctgccgcccgccatcgacccgctgcgc
cgccgcctgctgctcgccgaactgatcgaacggcacacgccggagggcgaagcggcgatc
acgggcgccgccgccttccagcttgccgacgggctggcgcgcgtgatcgaccagcttcat
tatgaggagcggacggtgtcggcgctcgtcgatctcgacttgggggccttcgccggccat
tggcaggcatcgctcgcgcggttgcggctgctcgtcgaccattggccgggcgtgctcgcc
gccaccggcagcatcgaccgcgccgagcgccgcaaccgattgctcgaccgcgtgcgcgaa
ggctggcgcaaggctccgccggcgcgcttcgtggttgcggcggggatcaccaccgcggcg
cccgccgtcgcccggctgctgcgcaccgtcgccggaatggagcgcggcatggtggtgcta
cccgggctcgacccggtcatggcgacagaggagtgggacgcgctcgggccgacgcgatcc
gatgccgacgatccggcgcgcccgctcgaaacgcatccgcaatatcatctcaagctgctg
ctcgaccgcatgggcgcgagccgcgacgaggttcaggcgtgggatgcggtgtccgatttc
gacggcccggaggcgcgcacgcccttcgtttcgttgctcctcgcgcccgccgcctatagc
gcgcagtggcaggcggcgggcgacctgtcggcggcgaccgtcggcctgtcgggcgcggtc
ttcgccgacgacgggcaggaggcgcaggggatcgcgctgctgatgcgcgaggcgatcgaa
acccccgggcgcaccgcggcgctggtgacccccgatcgcgctctggccgaacgggtcgcg
gcggcgctgacgcgctggggcatcgcggtcgacgacagcgccggccagccgctcgcgcag
acgccgccgggcgccctgctgctgctgcttgccggactggcggccgatttcgacccggtc
gcgctggtgtcgctgctcggccatccgctcgtgcgcaagggggaggagcgcgctgcgtgg
ctcgaccaggtgcggcgactcgacctgctgctgcgcgagccggggctgacgccgggctgg
gcgggcgtgacggcgcgcatcgcggcgcgcgcggcggacccgaaggcgcgcgggcacgca
ctggcggcggcgctcgggccatggtggggcgagctgtcggaggcgctcggcgcgacgctg
gcgcccttcgccgccgggccgacgccgcccgcgacgctgctcggcgccttgcaggcgggg
ctcgagcggctgaccggcgacgcggtatggaccggaccggcggggcggatgctcgccgaa
ctgttcgatgcgtgggcgctcgcgcgcggcgcgggcccggcgcgcgtcgatccggccgat
tttccggccatgctcggccagctattggcgcaggcgagcgtgcggcccccctatggcggg
cacccgcggctgttcatctggggcctgctcgaagcgcggttgcagcgcgccgacctgatg
atcctcggcgggctcgacgagggccgctggcccgccgcgacgcagcccgacccgtggctc
gcgcccggcatccgccgcctgctgggcctgccggcgcccgaacggcagcaggggctggcg
gcgcatgatttcgccggggcgctgggcgcgcgcgagatcgtcgtgacgcgcgcgcagcgc
agcggcggcgacccggcggtcgcgtcgcgattctggctgcggctgtcggcgctggcaggc
gacctcgccgagccggaccccggcggcgtgccgctgacccgcctcgcggccgaactcgat
gcgccgccgggcgagccgcggccgacgccgcggccgcgccccgcgcccccgctcgccgac
cggccgcgccggatcggggtcaccgcgctcgaccggctcgcgcgcgatcccttcgcttat
tatgcgaaccagatgctcggcctgtcgccgctcgatccgctcagcgccgcgcccgatccg
cgctggcgcggcacgcgcatccatacgctgttcgaggactgggtgcgcggcggcgcgacg
cgcgaggggttcgaggccgaaatcgccgcgctgcgtatcgacccggcgctcgacgccatc
gcgcgcgccttctggctgccgcgcatcgagcccgcgctgcgctgggcggcggagcaggtc
tggagtgccgaggggcgccggccgctcgcggtcgaagcgcggggcgagctgaccgccgac
ggcatcacgcttcacggtaaggccgaccggatcgaccgccacgacgacggcagccttgcc
atcgtcgattacaagtcgggcggcgcgccgagtgccaaggcggcgtacgacaggctcgac
aaccagctcggcctgctcggcctgatcgcgcgcgcgggcgggatggagggaatcgccgcc
gcgcccgtcgcgagcctcgaatattggagcctgcgccccgatcgccgcgcgggcggcgcc
gggaagatctcccgcacccatggaccgcgcggcgggctcaagagtgccgaagaggcgatc
gaccacgccgccggggcgctcgtcgaccttgccggacgctatctgctcggcgacgcaccg
ttcgcgccgggcgaggtcgcgggccccggcgattacgaccagctcatgcgccgcgacgaa
tggttcgggcgcggggagggcgagtga
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