Sphingopyxis granuli: SGRAN_3642
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Entry
SGRAN_3642 CDS
T04372
Symbol
radA
Name
(GenBank) DNA repair protein RadA-like protein
KO
K04485
DNA repair protein RadA/Sms
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_3642 (radA)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SGRAN_3642 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_30
AAA_22
AAA_16
AAA_5
Lon_C
AAA_24
RecA
AAA
SLFN-g3_helicase
nSTAND3
CobU
AAA_14
Glyco_hydro2_C5
NTPase_1
AAA_29
ATPase_2
Ribosomal_L37e
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AMG75981
UniProt:
A0AA86L4G9
LinkDB
All DBs
Position
complement(3986405..3987766)
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AA seq
453 aa
AA seq
DB search
MAKAKRQYVCQNCGAVSYRWQGQCADCGEWNTLVEEAAETVFSAKHDLSKGGRTLALETL
DEQSAMPERMLCGIAEFDRALGGGFVAGSATLIGGDPGIGKSTLLLQAAGRIARAGKSVV
YISGEEAAAQVRLRAQRLGLGDAPVALASATSVRDILATLEGRGADFVVIDSIQTMHSDL
IDSAPGTVSQVRASAQELIRYAKDSGAAIVLVGHVTKDGTIAGPRVLEHMVDTVLAFEGE
RSHQYRILRAVKNRFGGTDEIGVFAMGEEGLGEVANPSSLFLTDRSRDVPGSVVFPALEG
TRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLEARCGLQMGSAEVYLNIAGG
YRLTDPAADLAVAAALISAFSERPVPADAIVFGELSLSGEVRPVAHDALRLREAAKLGFS
SGWGPKGMKGVKGIGVTGFGRLGELVDLMLGRA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcgaaacgccaatatgtctgccagaattgcggcgccgtcagctatcgctgg
cagggccagtgcgccgattgcggcgagtggaacacgctggtcgaggaagcggccgaaacg
gtcttttccgcgaagcacgacctgtcgaagggcggccgcacgctcgcgctcgaaacgctc
gacgaacagagtgcgatgcccgagcggatgctgtgcggcatcgccgagttcgaccgcgcg
ctcggcggcggcttcgtcgccgggtcggcgacgctgatcggcggcgatccggggatcggc
aaatcgaccttgctgcttcaggccgcgggccggatcgccagggcgggcaagtcggtcgtc
tatatcagcggcgaggaagcggcggcgcaggtgcggctgcgcgcgcagcggctggggctc
ggcgacgcgccggtggcactggcgagcgcgacttcggtgcgcgacatcctcgcgacgctg
gaggggcgcggcgccgatttcgtcgtcatcgattcgatccagacgatgcacagcgacctg
atcgacagcgcgccgggcaccgtcagccaggtgcgcgcgagcgcgcaggaactgatccgc
tatgccaaggacagcggcgcggcgatcgtgctcgtcggccatgtgacgaaggacggaacg
atcgcgggaccgcgcgtgctcgaacatatggtcgacaccgtgctggcgttcgagggcgag
cgcagccaccagtatcgcatcctgcgcgcggtcaagaaccgcttcggcggcaccgacgag
atcggggtgttcgcgatgggcgaggaggggctgggcgaggtcgccaacccgtcgagcctg
ttcctgaccgaccgcagccgcgacgtgccggggtcggtggtgttccccgcgctggagggc
acgcggccggtgctggtcgaggtgcaggcgctgaccgtccgccttgcgagcggcgcgacg
ccgcgccgcgccgtcgtcggctgggacagcgggcggctcgcgatggtgctcgcggtgctc
gaggcgcgctgcgggctccagatggggagcgccgaagtctatctgaacatcgcgggcggc
tatcgcctcaccgatccggcggccgacctcgcggtggcggcggcgctgatctctgcgttc
agcgagcggccggtgcccgccgatgcgatcgtcttcggcgaactgtcgctgtcgggcgag
gtgcgtccggtcgcgcacgacgcgctgcgcctgcgcgaggcggcgaagctcggcttttca
agcggctgggggccaaaggggatgaagggtgtgaaggggatcggcgtcaccggcttcggc
cggctcggcgaactcgttgacctgatgctcgggcgtgcctag
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