Sphingopyxis granuli: SGRAN_3689
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Entry
SGRAN_3689 CDS
T04372
Symbol
fumC
Name
(GenBank) Fumarase C
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi00020
Citrate cycle (TCA cycle)
sgi00620
Pyruvate metabolism
sgi00720
Other carbon fixation pathways
sgi01100
Metabolic pathways
sgi01110
Biosynthesis of secondary metabolites
sgi01120
Microbial metabolism in diverse environments
sgi01200
Carbon metabolism
Module
sgi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sgi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SGRAN_3689 (fumC)
00620 Pyruvate metabolism
SGRAN_3689 (fumC)
09102 Energy metabolism
00720 Other carbon fixation pathways
SGRAN_3689 (fumC)
Enzymes [BR:
sgi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
SGRAN_3689 (fumC)
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
AMG76028
UniProt:
A0AA86L526
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All DBs
Position
4034784..4036199
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AA seq
471 aa
AA seq
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MSDTRIESDSLGEIAVPADAYWGAQTQRSIENFPFGARERMPVGIVHALALVKQAAARVN
RRHGLSAEKADAIEAAAAEVAAGEHDDQFPLVIWQTGSGTQSNMNANEVIAGRANEMLTG
TRGGKVPVHPNDDVNRGQSSNDSFPTAMHVAATLAMRSRLLPALDVLIEALRAKAEAWDD
IVKIGRTHLQDATPLTLGQEFSGYHAQLLLCRTRTEPLVQHALPHLAQGGTAVGTGLNAP
AGFAGDFAAEMTAITGVAFASAPNKFEALASHDMLVDLSGRLNTLAVALTKIANDIRLLG
SGPRAGLGEIDLPANEPGSSIMPGKVNPTQCEMLTMVAAQVIGNHQAVTVGGMQGHLELN
VFKPLIGANVLRSIDLLATGMESFATRCVAGIEPNRPRIAELVERSLMLVTALAPEIGYD
NAAMIAKHAHKTGSTLREAALALGFVDAATFDRVVDPRHMLGPEPEGRVAD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgcggatcgaaagcgacagcctgggcgagatcgcggtgcccgccgacgcc
tattggggcgcgcagacgcagcggtcgatcgagaatttccccttcggcgcgcgcgagcgg
atgccggtcgggatcgtccacgcgctcgcgctggtcaagcaggcggcggcgcgggtcaac
cgccgccacggcctgtccgccgaaaaagccgacgcgatcgaggccgctgccgccgaagtc
gccgccggcgagcatgacgaccagttcccgctcgtcatctggcagacgggcagcggcacc
cagagcaacatgaacgccaacgaggtgatcgccggccgcgccaacgagatgctgaccggc
acgcgcggcggcaaggtgccggtgcatcccaacgacgacgtcaaccgcggccagtcgtcg
aacgacagctttccgaccgcgatgcacgtcgccgcgacgctggcgatgcgcagccgcctg
ctgccggcgctcgacgtgctgatcgaggcgctgcgcgccaaggcggaggcgtgggacgat
atcgtcaagatcggccgcacccatctgcaggatgcgacgccgctgacgctggggcaggaa
ttttcgggctatcacgcccagctgcttctgtgccggacgcgcaccgaaccgctggtgcag
catgccctgccgcatctcgcgcagggcgggaccgcggtcggcaccgggctgaacgccccc
gcgggcttcgccggggatttcgcggccgagatgaccgcgatcaccggcgtcgccttcgca
agcgctccgaacaagttcgaggcgctggcgagtcacgacatgctggtcgacctgtcgggg
cggctgaacacgctcgcggtcgcgctgaccaagatcgccaacgacatccgtctgctcggt
tccggcccgcgcgccgggctgggcgagatcgacctgcccgcgaatgagcccggcagctcg
atcatgccgggcaaggtcaacccgacccagtgcgagatgttgacgatggtcgcggcgcag
gtgatcggcaatcatcaggcggtgaccgtcggcgggatgcaggggcatctcgaactcaat
gtcttcaagccgctgatcggcgccaatgtgctgcgctcgatcgacctgctcgcgaccggc
atggaaagcttcgcgacccgctgcgtcgccgggatcgagccgaaccgcccgcgaatcgcc
gaactggtcgagcgctcgctgatgctcgtcaccgcgctggcgcccgagatcggctatgac
aacgcggcaatgatcgcaaaacacgcgcacaaaaccggctcgaccctgcgcgaggcggcg
ctggcgctgggtttcgtcgatgcggcgaccttcgaccgggtcgtcgacccgcgccatatg
ctcggtccggaacccgaaggccgcgtcgcggattga
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