Sphingopyxis granuli: SGRAN_3880
Help
Entry
SGRAN_3880 CDS
T04372
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgi02000
]
SGRAN_3880
Transporters [BR:
sgi02000
]
Other transporters
Pores ion channels [TC:
1
]
SGRAN_3880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
AMG76212
UniProt:
A0AA86GN88
LinkDB
All DBs
Position
4246168..4248402
Genome browser
AA seq
744 aa
AA seq
DB search
MKRKTHLLFCATAAWTAMAGPSFAQDVAPPADAASEAGDDGAIVVTARRREERLSDVPTA
ASVIDAAALTDRGGAQTSGELLADQPSIRFNNLSSSVTSEISIRASSTARATNGDPSVGL
YRNGSYIGGGAVGGRNFSRLDMLDIGRVEVLRGTQGALYGRNAVGGAINIISAEPGFDLS
GWASARYGFETNSFQMQGAVNVPLGEGAAVRISGDLVQQDKGFFYNPDNDVYFDRQKGHG
LRGQLRLARGPVDIVLLAETQRLTTPAIHYQIFIPAGTPGFPGGYIQDRFRYPWSTAPRA
SQDVDGLQAIVRVDLGGARLNATTFFRKRHSEYDLDNDGVSAAELARARAAGQVGPATPI
DPGSASYVVDTTDMLSQDLHVTGGSDRLTWLFGVEAMLLDSDFSVTTTRTPTLANPSPGN
VAPARLHFESYAAYGSLGLDLTDRLNLTGELRYTRDSRSISARLYDLGTGLPTGGPTRVI
DDSIEADNLSYNATLSYKLAPRILAYAKVGSSYRAGGFNTRLSDPRAPSPVEVLFGNENS
TSYEVGIKGQPARRGYFAIAGYYTDLRDLIAQVDDGCALTNPTCPVAAVSYLTNAGNAKS
WGIEAEYSQGFDIGAGSGRLALSGSRQGGEVKSGRYAGLDLAQVPDWLASANLNLRYPVA
RDVTLTGNILVSAQWGGKQELTPTSVDLDDYRLVNLRFGVEFGGFGIAAFANNVFDKVYY
VAQAPTINRYSQPRVVGLEARYSF
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaagacgcatcttcttttctgcgcgaccgcggcctggaccgcgatggccggc
ccatccttcgcgcaggacgtcgcgcccccggccgacgcggcgtccgaggcgggcgacgac
ggcgccatcgtcgtcaccgcgcggcgccgcgaagaacgattgtcggacgttccgaccgcg
gcttcggtgatcgacgccgccgcgctgaccgatcgcggcggcgcgcagacgagcggcgaa
ctgctcgccgatcagccgagcatccgcttcaacaacctcagttcgtcggtgacctcggaa
atatcgatccgcgcctcctcgaccgcgcgcgcgaccaacggcgaccccagcgtcggcctc
tatcgcaacgggtcctatattggcggcggcgccgtcggcgggcgcaatttcagccgcctc
gacatgctcgacatcggccgggtcgaggtgctgcgcggcacgcagggggcgctctatggc
cgcaacgccgtcggcggcgcgatcaacatcatctcggccgagcccggattcgacctctcc
ggctgggcgagtgcccgctacggcttcgagaccaacagcttccagatgcagggcgcggtc
aacgtcccgctcggcgagggcgcagcggtgcgcatcagcggcgacctggtccagcaggac
aagggcttcttctacaaccccgacaatgatgtctatttcgaccggcagaaggggcacggc
ctgcgcggccagcttcgcctcgcgcgcggccccgtcgacatcgtcctgctcgccgaaacg
cagcggctgacgacccccgcgatccattatcagatcttcattccggccggcacgccgggc
tttcccggcggctatatccaggatcgcttccgctatccctggagcaccgcgccgcgcgcc
agccaggacgtcgacgggctgcaggcgatcgtgcgcgtcgaccttggcggcgcccggctc
aacgcgacgaccttcttccgcaagcggcacagcgaatatgatctcgacaacgacggcgtc
agcgccgcggaactggcgcgcgcccgcgctgccgggcaggtcgggccggcgacgccgatc
gatccgggcagcgcctcctatgtcgtcgacacgaccgacatgctgtcgcaggatctgcac
gtcaccggcggcagcgatcgcctgacctggctgttcggtgtcgaggcgatgctgctcgac
agcgacttctcggtgacgacgacccgcacgccgacgctcgccaatccgtcgcccggcaac
gtcgcacccgcgcggctccatttcgaaagctatgccgcctatggctcgctcggcctcgat
ctcaccgacaggctcaacctgaccggcgagctgcgctatacccgcgacagccgcagcatc
agtgcccggctctacgatctgggaaccgggcttccgaccggcggaccgacccgcgtcatc
gacgacagcatcgaagccgacaacctctcctacaatgcgacgctgtcctacaagctcgcg
ccccgcatcctcgcctatgccaaggtcgggagcagctatcgcgccggcgggttcaacacc
cgcctgtccgacccgcgcgcgccgagcccggtcgaagtgctgttcggcaacgagaacagc
acgagctatgaggtcgggatcaagggccagcccgcccgccgcggctatttcgcgatcgcg
ggctattacaccgatcttcgcgacctgatcgcgcaggtcgacgacggctgcgccctgacc
aatccgacctgcccggtggccgcggtcagctatctgaccaatgccggcaatgcgaagagc
tggggcatcgaggccgaatacagccagggattcgacatcggcgcgggaagcgggcgcctc
gcgctcagcgggtcgcgtcagggcggcgaggtcaagagcggacgctacgcgggtctcgac
ctggcgcaggtgcccgactggctggcgtcggcgaacctcaatctgcgctacccggtcgcg
cgcgacgtgaccctcaccggcaacatcctggtgagcgcgcagtggggcggcaaacaggaa
ctgacgccgacctcggtcgacctcgacgactatcggctcgtcaacctgcgcttcggcgtc
gaattcggcgggttcggcatcgccgccttcgccaacaacgtcttcgacaaggtctattat
gtcgcgcaggcgccgacgatcaaccgctacagccagccgcgcgtcgtcggtctcgaagcc
cggtacagcttctga
DBGET
integrated database retrieval system
