Sphingopyxis granuli: SGRAN_3918
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Entry
SGRAN_3918 CDS
T04372
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi00730
Thiamine metabolism
sgi01100
Metabolic pathways
sgi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SGRAN_3918 (thiC)
Enzymes [BR:
sgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SGRAN_3918 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AMG76248
UniProt:
A0AA86GYD0
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All DBs
Position
4288780..4290672
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AA seq
630 aa
AA seq
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MADIDSRLDKTTAASIGVTTGPIRGSRKVHVACPTGSGIRVAMREIDLDPHSGEPSVRVY
DTSGPYTDPNARIDIAQGLPELRSAWIRARGDVEEVAQREVRPEDNGQLGPDRSGGVPAF
PNVRKTVLRARPGANVSQMHYARRGIVTPEMEYVATRENLGRERLAEYVRDGQDWGASIP
DYVTPEFVREEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVATEVDK
MVWSIRWGADTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEELTWEIF
RDTLIEQAEQGVDYFTIHAGVRLPYVPLAAKRVTGIVSRGGSIMAKWCLAHHRESFLYDH
FDEITEIMKAYDIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWDQDVQVMIEGP
GHVPMHKIKENMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCY
VTPKEHLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSKARFEFRWRDQFNL
SLDPDTAEQYHDQTLPAEGAKTAHFCSMCGPKFCSMKISQEVREFAKLQNQDSAGFLAAE
EAEKGMAQMSEVYEETGRELYMGAGGREHD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcgattcccgcctcgacaagacgaccgccgccagcatcggcgtcaccacc
ggcccgatccgcggcagccgcaaggtccatgtcgcgtgtcccaccggcagcggcatccgg
gtcgcgatgcgcgagatcgacctcgacccgcacagcggcgaacccagcgtccgcgtctac
gacaccagcggcccctacaccgacccgaacgcccgcatcgacatcgcacagggccttccc
gaactgcgcagcgcctggattcgcgcccgcggcgacgtcgaggaggtggcgcagcgcgag
gtgcggccggaggacaacggccagctcggccccgaccgcagcggcggcgtccccgccttc
cccaacgtccgcaagaccgtgctgcgcgccaggccgggcgcgaacgtcagccagatgcac
tatgcccgccgcggtatcgtcacgcccgagatggaatatgtcgcgacgcgggagaatctc
ggtcgcgagcgactcgccgaatatgtccgcgacgggcaggactggggcgccagcatcccc
gattatgtcacgcccgaattcgtccgcgaagaggtcgcgcgcggccgcgcgatcatcccc
agcaacatcaaccaccccgaaagcgagccgatggcgatcggccgcaacttcctcgtcaag
atcaacgccaatatcggcaacagcgcggtcgcgagcgacgtcgcgaccgaggtcgacaag
atggtctggtcgatccgctggggcgccgacaccgtcatggacctgtcgacggggcgcaac
atccacgacacgcgcgaatggatcatccgcaactcgcccgtcccgatcggcaccgtcccc
atctatcaggcgctggagaaggtcggcggcatcgccgaggagctgacgtgggagattttc
cgcgacacgctgatcgagcaggccgagcagggcgtcgactatttcaccatccacgcgggc
gtccgcctgccctacgtcccgctcgccgcgaagcgcgtcaccggcatcgtcagccgcggc
ggcagcatcatggcgaaatggtgcctcgcgcatcacagggaaagcttcctctacgaccat
ttcgacgagatcaccgagatcatgaaggcctatgacatcgcctacagcctcggcgacggc
ctgcgccccggcagcatcgccgacgcgaacgacgaggcgcagttcgccgagctttacacg
ctgggcgaactgaccaagcgcgcgtgggaccaggatgtgcaggtgatgatcgagggcccg
ggccacgtcccgatgcacaagatcaaggagaatatggacaagcagctagaggcgtgcggc
gaggcgcccttctacacgctcgggccgctgaccaccgacatcgcgccgggctacgaccat
atcaccagcggcatcggcgccgcgatgatcggctggtacggcaccgcgatgctctgttac
gtcacgcccaaggagcatctcggcctgcccgaccgcgacgatgtgaaggtcggcgtcgtc
acctacaagctcgccgcccacgccgccgacctcgccaagggccaccccgccgccaaggtc
cgcgacgacgcgctgtcgaaggcgcgcttcgaattccgctggcgcgaccagttcaacctg
agcctcgaccccgacacggccgagcaataccacgaccagaccctcccggccgagggcgcc
aagaccgcccatttctgcagcatgtgcgggccgaaattctgctcgatgaagatcagccag
gaagtgcgcgaattcgcaaagctgcaaaatcaggacagcgcgggtttccttgcggcggag
gaagccgaaaagggcatggcgcagatgagcgaagtctatgaagaaacggggcgcgaactg
tatatgggcgcgggcggccgcgagcatgattaa
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