Sphingopyxis granuli: SGRAN_3960
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Entry
SGRAN_3960 CDS
T04372
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
sgi
Sphingopyxis granuli
Pathway
sgi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SGRAN_3960 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgi02000
]
SGRAN_3960 (msbA)
Transporters [BR:
sgi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SGRAN_3960 (msbA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
nSTAND3
MMR_HSR1
Zeta_toxin
AAA_18
AAA_33
AAA_21
AAA_25
Cytidylate_kin
RsgA_GTPase
Mg_chelatase
DUF87
Motif
Other DBs
NCBI-ProteinID:
AMG76290
UniProt:
A0AA86GNB7
LinkDB
All DBs
Position
complement(4344742..4346556)
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AA seq
604 aa
AA seq
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MPPDTTSSADAAREPPVLATLKRFLPYLWPAGHRGHKVRIVLAALIVLASKGVQLSMGFL
YGAAIDRMAPGMEEGVALAIGLVLAYAGARFAGVLFDNLRNVVFERVGQDATRELATATF
THLHALSLRFHLARRTGEVTKVIERGTKSIDTMLYFLLFNIAPTLIELVAVLVIFWSKFS
FGLAGATALMVVVYIVFTRRVTDWRNALRTRMNDLDTLTVGRSVDSLLNYETVKYFGAEA
REAARYRDVADQYARAAVKSENSLAWLNVGQSLITNAAMAGAMAYTVWGWSKGQFAVGDV
VLVNTLLAQLFRPLDMLGMVYRVIRQGLIDMEAMFRLIDTPPEIADAPDAWPLVVAGGAV
TFDNVVFGYEPDRTILNGVSFAVGAGETLAIVGPSGAGKSTIARLLFRFYDPQQGRVLID
EQDIAQVTQASLRAAIGIVPQDTVLFNDSIGYNIAYGREGASAGAIAAAAEGAAIDGFIA
LLPQGYDTEVGERGLKLSGGEKQRVAIARTLLKNPPVLILDEATSALDSRTEAAIQATLD
RIAERRTTLVIAHRLSTVTGADRIIVLEKGRVAETGTHDQLLAMRGLYADMWARQQAEKE
EGTV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgacacgacctcctctgccgatgcggcacgcgaaccgcccgttcttgcgacg
ctgaagcgcttcctgccctatctgtggccggcggggcatcgcgggcacaaggtgcgcatc
gtcctcgccgcgctgatcgtgctcgcgtcgaagggcgtgcagctttcgatgggcttcctc
tacggcgccgcgatcgaccgcatggcgccggggatggaggaaggcgtggcgctcgcgatc
gggctggtgctcgcctatgccggcgcgcgcttcgcgggcgtgctgttcgacaatctgcgc
aacgtcgtcttcgagcgcgtcggacaggacgcgacgcgcgaactggcgaccgcgaccttc
acccatcttcatgcgctgtcgctgcgcttccacctcgcgcggcgcaccggcgaggtgacg
aaggtgatcgagcgcgggaccaagagcatcgatacgatgctctatttcctgctgttcaac
atcgcgccgacgctgatcgagctggtcgcggtgctcgtcatcttctggagcaagttcagc
ttcggcctcgcgggcgcgaccgcgctgatggtcgtcgtctatatcgtcttcacccgccgc
gtcaccgactggcgcaacgcgctacggacccggatgaacgatctcgacacgctgaccgtc
gggcgcagcgtcgacagcctgctcaattacgagacggtcaaatatttcggcgccgaggcg
cgcgaggcggcgcgctatcgcgacgtcgccgaccaatatgcacgcgccgcggtgaagagc
gagaacagcctcgcctggctcaacgtcgggcagagcctgatcaccaacgcggcgatggcg
ggggcgatggcctatacggtgtggggctggtcgaaggggcagttcgcggtcggcgacgtg
gtgctggtgaacacgctgcttgcgcagctctttcgcccgctcgacatgctcggcatggtc
tatcgcgtcatccgccaggggctgatcgacatggaggcgatgttccgcctgatcgacacc
ccgccggagatcgccgatgcccccgatgcctggccgctggtggtggccggcggcgcggtg
acgttcgacaatgtcgtcttcggctacgaacccgaccgcacgatcctgaacggggtcagc
tttgcggtcggggcgggcgagacgctggcgatcgtcgggccgtcgggggcgggcaagtcg
acgatcgcgcggctgctgttccgcttctacgatccgcagcaggggcgcgtcctgatcgac
gaacaggatatcgcgcaggtcacgcaggccagcctgcgcgctgcgatcggcatcgtcccg
caggatacggtgctgttcaacgacagcatcggctacaatatcgcctacggccgcgagggt
gcgagcgccggggcgatcgcggcggcggccgagggtgcggcgatcgacggcttcatcgcg
ctgctgccgcaaggctatgacaccgaggtgggcgagcgcgggctcaagctgtcgggcggc
gaaaagcagcgcgtcgcgatcgcgcgcaccctgctcaagaaccccccggtgctgatcctc
gacgaggcgacgagcgcgctcgacagccggaccgaagcggcgatccaggcgacgctcgac
cgcatcgccgaacggcgcacgacgctggtcatcgcgcaccgcctgtcgacggtgacgggc
gccgaccgcatcatcgtgctcgaaaaggggcgggtggcggaaaccgggacgcacgaccag
ctgctagcgatgcgcgggctctacgccgacatgtgggcgcgccagcaggcggagaaggaa
gagggaacggtctag
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