KEGG   Sphingopyxis granuli: SGRAN_3963
Entry
SGRAN_3963        CDS       T04372                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
sgi  Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:sgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sgi03016]
    SGRAN_3963
Enzymes [BR:sgi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SGRAN_3963
Transfer RNA biogenesis [BR:sgi03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SGRAN_3963
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AMG76293
UniProt: A0AA86GYQ4
LinkDB
Position
complement(4347897..4348514)
AA seq 205 aa
MSVYFHEEDLPEGVLGPGAVAIDTETMGLNPLRDRLCLVQISDGSGDEHLVRFGPGSAYD
APVLKAILTDPGRLKLFHFARFDIAALQHALGVVTAPVYCTKIASKLVRTYTDRHGLKEL
VRELLGQEVSKQQQSSDWGAAELTEAQRDYAASDVRFLHAMKTVLDARLAREGRTELAQA
CFDFLPARAALDLAGWPEVDIFAHT
NT seq 618 nt   +upstreamnt  +downstreamnt
atgagcgtatatttccacgaagaagacctgcccgaaggcgtgctggggcccggcgccgtc
gcgatcgataccgaaacgatggggctcaacccgctgcgcgaccggctgtgcctcgtccag
atcagcgacggttcgggcgacgagcatctcgtccgcttcggccccggcagcgcctatgac
gcgccggtgctgaaggcgatactgaccgaccccggccgcctgaagctctttcatttcgcg
cgtttcgacatcgccgcgctgcagcatgcgctgggggtcgtcaccgcgcccgtctattgc
accaagatcgcctcgaagctggtgcgcacctacaccgaccgccacgggctcaaggaactg
gtgcgcgaactgctggggcaggaagtgtcgaagcagcagcagtcgagcgactggggcgcc
gccgaactgaccgaggcgcagcgcgactatgccgcgagcgacgtgcgctttctccacgcg
atgaagaccgtgctcgacgcgcggctcgcgcgtgaggggcgtaccgaactggcgcaggcc
tgtttcgacttcctgccggcgcgcgcggcgctcgacctcgcgggctggcccgaggtcgac
atcttcgcgcatacgtga

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