Streptomyces genisteinicus: IAG43_04650
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Entry
IAG43_04650 CDS
T07903
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgj
Streptomyces genisteinicus
Brite
KEGG Orthology (KO) [BR:
sgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgj03021
]
IAG43_04650
Transcription machinery [BR:
sgj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IAG43_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
DUF7343
HTH_24
NirdL-like_HTH
MarR
HTH_3
HTH_31
HTH_AraC
DUF1492
Sigma70_ECF
Crp
Lambda_CIII
Motif
Other DBs
NCBI-ProteinID:
QNP62290
UniProt:
A0A7H0HP24
LinkDB
All DBs
Position
complement(1063820..1064695)
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AA seq
291 aa
AA seq
DB search
MSTASTIPTERTSAGTQSPRMAELDLPDVQNPGEVAPKDAREISKVFFARLNSLEEGTHE
YQYVRNTLIELNLALVKYAAGRFRNRAEQMEDIVQVGTIGLIKAIDRFELSREVEFATFA
VPYIVGEIKRFFRDTSWAVHVPRRLQELRIDLAKAVDELSQKLDHAPTTAELAEHLGIDE
EEVIEGVVASNGYTAGSIDMPMDDASDHAAVPLSDRLGAPDADLEIAENVQALKPMIEGL
DERDRRILQMRFGDEMTQSEIGEALGVSQMHVSRLLSRITGRLREGLLLVE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacggccagcacgatcccgaccgaacgcacgtccgccgggacccagagcccgcgc
atggcggagctcgaccttccggatgtgcagaacccgggggaggttgcaccgaaggacgca
cgcgagatctcgaaggtgttcttcgcgaggctgaacagcctcgaggaggggacccacgag
taccagtacgtccgcaacaccctcatcgaactcaacctggcgctggtgaagtacgccgcc
gggcgcttccgcaatcgtgcggaacagatggaggacatcgtccaggtcggcaccatcggc
ctgatcaaggcgatcgaccgcttcgagctcagccgcgaggtcgagttcgccaccttcgcc
gtcccgtacatcgtgggcgagatcaagcgcttcttccgcgacacgagctgggcggtccat
gtgccgcgcaggctccaggagctgcggatcgacctcgccaaggcggtggacgagctctcc
cagaagctcgaccacgcgccgaccacggcggagctcgccgagcacctcgggatcgacgag
gaagaggtcatcgagggtgtcgtcgcgagcaacggctacacggccggctcgatcgacatg
ccgatggacgacgcctccgaccatgcggccgtgcccctctccgaccgtctcggcgccccc
gacgcggacctggagatcgcggagaacgtgcaggcgctcaagccgatgatcgagggcctc
gacgagcgtgaccgccgcatcctccagatgcgcttcggcgacgagatgacgcagtccgag
atcggcgaggccctgggcgtctcgcagatgcacgtctcccggctgctgtcccggatcacc
gggcggctgcgcgagggtctgctgctcgtggagtga
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