Streptomyces genisteinicus: IAG43_05510
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Entry
IAG43_05510 CDS
T07903
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
sgj
Streptomyces genisteinicus
Brite
KEGG Orthology (KO) [BR:
sgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgj03019
]
IAG43_05510
Enzymes [BR:
sgj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IAG43_05510
Messenger RNA biogenesis [BR:
sgj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IAG43_05510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QNP67251
UniProt:
A0A7H0I385
LinkDB
All DBs
Position
complement(1243316..1246144)
Genome browser
AA seq
942 aa
AA seq
DB search
MTEDLSPAERYAAARVRAAEAATALAPFRAMYDFDLDPFQIEACQALEAGKGVLVAAPTG
SGKTIVGEFAVHLALEQGRKCFYTTPIKALSNQKYADLVKRHGADRVGLLTGDNSVNPDA
PVVVMTTEVLRNMLYAGSQALRGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPDSVTLVSL
SATVSNAEEFGDWLDTVRGDTQVIVSEERPVPLWQHVMAGRRMYDLFEESTDHGGRGRTK
REVNPDLVRLARMENQRGYNPRDRRRGKMVREADRERERRQRSRIWTPGRAEVIDRLDTE
GLLPAITFIFSRAACEAAVQQCLHAGLRLNDEAARATVRSIVEERTASIPTEDLHVLGYY
EWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRAMDPGALAGLAGTRTYPLRSS
FKPSYNMAVNLVHQFGRHRSRELLETSFAQFQADRSVVGISRQVQRNEEGLDGYREGMTC
HLGDFEEYARLRRELKDRETELAKQGASQRRAAAAASLERLKPGDVIHVPTGKFAGLALV
LDPGLPAGRSNGHRGFEHHDGPRPLVLTAERQVKRLASIDFPVPVEALERMRVPKSFNAR
SPQSRRDLASALRTKAGHIVPERHRKQRAAAADDREIARLRTELRAHPCHGCDEREDHAR
WAERYHRLQRDTRQLERRIEGRTNTIARTFDRIVALLTEMDYLRGEEVTEHGRRLARLYG
ELDLLASECLRDGVWEGLGPAELAACVSALVYEARQADDAVAPKVPGGRAKEALGEMIRI
WGRLDALEEEFKINQAEGVGQREPDLGFAWAAHQWASGKALDEVLREAEMPAGDFVRWCK
QVIDVLGQVAAAAPREDSTVAKNARKAVDGLLRGVVAYSSVG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggacctctcacccgccgagcgctatgccgccgcccgcgtccgcgcggcggag
gccgccaccgcactggcccccttccgcgcgatgtacgacttcgacctcgacccgttccag
atcgaggcgtgtcaggcgctggaagccggcaagggcgtgctcgtcgcggcacccaccggc
tccggcaagaccatcgtcggcgagttcgccgtccacctggccctcgagcagggccgcaaa
tgcttctacaccacgcccatcaaggccctgtccaaccagaagtacgcggacctggtgaag
cgccacggcgccgacagggtcggcctgctcaccggcgacaacagcgtcaacccggacgcc
ccggtggtcgtgatgaccaccgaggtgctgcggaacatgctctacgcgggctcgcaggcg
ctgcgcggcctcggctacgtcgtgatggacgaggtgcactacctctccgaccggttccgc
ggcgcggtgtgggaggaagtgatcatccacctccccgattccgtgaccctggtgtcgctc
tccgcgaccgtgtcgaacgcggaggagttcggcgactggctggacaccgtccggggcgac
acccaggtgatcgtctccgaggagcggcccgtgccgctgtggcagcacgtcatggccggc
cgccggatgtacgacctcttcgaggagagcaccgaccacggcggccgcggcaggaccaag
cgcgaggtcaacccggatctggtccgcctggccaggatggagaaccagcgcggctacaac
ccgcgggaccggcggcgcgggaagatggtgcgcgaggcggaccgcgagcgcgagcggcgc
cagcgcagccggatctggacccccggccgtgccgaggtcatcgaccggctcgacaccgag
ggcctgctgcccgccatcaccttcatcttcagcagggccgcctgcgaggcggccgtgcag
cagtgcctccacgcgggcctgcggctcaacgacgaggcggcgcgcgccacggtgcgctcg
atcgtcgaggagcgcaccgcctccatcccgaccgaggatctccacgtcctcgggtactac
gagtggctcgaaggtctggagcgcggcatcgccgcccaccacgcgggcatgctgccgacg
ttcaaggaggtcgtggaggagctgttcgtccgcggcctggtcaaggccgtcttcgccacc
gagaccctcgcgctcggcatcaacatgcccgcgcgctcggtggtgttggagaagctcgtc
aagtggaacggcgagcagcacgcggacatcacccccggcgagtacacccagctgaccggc
cgggccggccgccggggcatcgacgtcgaggggcacgcggtcgtcctgtggcagcgcgcc
atggacccgggcgcgctcgccggcctcgccggcacccgcacgtatccgctccgttccagc
ttcaagccctcgtacaacatggccgtcaacctcgtgcaccagttcgggcggcaccgctcg
cgggagctgctggagacgtccttcgcccagttccaggccgaccgctcggtggtcggcatc
tcccgccaggtccagcgcaacgaggagggcctcgacggctaccgcgaggggatgacctgt
cacctcggcgacttcgaggagtacgcgcggctgcggcgtgagctcaaggaccgggagacg
gaactcgccaagcagggcgcctcgcagcgccgggcggcggccgcggcctcgctggagcgg
ctgaagccgggcgacgtgatccacgtgccgacgggcaagttcgccggactcgccctggtg
ctcgaccccgggctgcccgccgggcggtccaacgggcaccgcggcttcgagcaccacgac
ggcccgcgtcccctggtgctcaccgccgaacgccaggtcaagcggctcgcgtcgatcgac
ttcccggtgcccgtggaggcgctggagcggatgcgcgtcccgaagtccttcaacgcccgc
tcgccgcagtcccggcgcgacctggcgtccgcgctgcggacgaaggccggccacatcgtg
ccggagcggcaccgcaagcagcgtgcggcggcggccgacgaccgggagatcgcccgcctg
cgcaccgagctgcgggcccacccgtgccacggctgcgacgagcgcgaggaccacgcccgc
tgggccgagcgctaccaccggctgcagcgcgacacccgccagctggaacgccgcatcgag
ggccgcaccaacaccatcgcgcggaccttcgaccggatcgtggcgctgctgacggagatg
gactacctccgcggcgaggaggtcaccgagcacggccggcggctggcgcggctctacggc
gaactggatctgctcgccagcgaatgcctgcgcgacggggtctgggagggcctcggtccc
gccgaactcgcggcctgcgtctcggcgctggtctacgaggcccgccaggcggacgacgcg
gtggcgcccaaggtcccgggcggccgggccaaggaggcactcggcgagatgatccggatc
tggggccggctggacgccctggaggaggagttcaagatcaaccaggcggagggcgtgggg
cagcgcgagcccgacctcggcttcgcctgggccgcccaccagtgggcctcgggcaaggcg
ctcgacgaggtgctgcgcgaggcggagatgcccgcgggcgacttcgtgcgctggtgcaag
caggtcatcgacgtcctcggccaggtcgcggcagccgcgccccgggaggacagcacggtg
gccaagaacgcccgcaaggccgtcgacgggctgctccgcggcgtcgtggcgtacagctcc
gtgggctga
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