Streptomyces genisteinicus: IAG43_18685
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Entry
IAG43_18685 CDS
T07903
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sgj
Streptomyces genisteinicus
Pathway
sgj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAG43_18685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgj03021
]
IAG43_18685
03400 DNA repair and recombination proteins [BR:
sgj03400
]
IAG43_18685
Enzymes [BR:
sgj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAG43_18685
Transcription machinery [BR:
sgj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAG43_18685
DNA repair and recombination proteins [BR:
sgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAG43_18685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
QNP64740
UniProt:
A0A7H0HW24
LinkDB
All DBs
Position
4284908..4288810
Genome browser
AA seq
1300 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDDERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVIGE
GRSFGSTAEAIMAFDARELSLQAKVDIRFPVGTIPPRGWTPPAPEEGEENTWQQGDSFRL
NTTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKSSGFFWA
TRSGVTVAISDVVVPEAKKEIVAGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNE
VAEAMNANFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGL
SVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLRIAER
GADGVLRKAEDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDAVVAAGVEEVKTRSV
LTCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDI
TQGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKIVVTPDDGSDETAYPISKRAK
LKVREGDHVQVGEPLAFGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEI
IIRQMLRRVTIIESGDAELLPGELVERSRFETENRRVVTEGGHPASGRPQLMGITKASLA
TESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTE
EAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctggccaccgcggacgacatc
cggacctggtcccacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
ccggaaaaggacgggctcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacccgcgccaaggtgcgccgcgagcggatgggccacatcgagctggccgctccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctgggatacctgctggacctg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatgatcacgttcgtcgac
gacgagcgccgcacgcgcgacctgccgtcgctggaggcccacgtctccgtcgagcgccag
cagatcgagaaccgccgcgacgccgacctcgaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctgcgcgaccgcgcccagcgcgagatcgaccgtctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttcgacggctcgatgggcgccgccgcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagacctccaacagccccaagggcatggtgctggactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggcggtcgacgcc
ctcttcgacaacggccgccgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tccctgagcgacatgctcaagggcaagcagggccgtttccgtcagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcggccgc
accgtggtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctccaacaacatcctcaagccggccgacggccgtccggtcaccatgcccacccaggac
atggtgctcggcctcttcttcctcaccacggacgaggaggagcgcgaggtcatcggcgag
ggccggtccttcggctccaccgccgaggcgatcatggccttcgacgcccgcgagctctcg
ctccaggcgaaggtcgacatccgcttcccggtgggcaccatcccgccgcgcggctggacc
ccgccggcgcccgaggagggcgaggagaacacctggcagcagggtgacagcttccggctg
aacaccacgctgggccgtgcgctcttcaacgagctgctgcccgaggactacccgttcgtc
gactactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctac
cccaaggtcatcgtggcggcgacgctcgacaacctgaagtcctccggcttcttctgggcg
acccgttccggtgtcaccgtggccatctccgacgtcgtcgtccccgaggcgaagaaggag
atcgtcgcgggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctg
atcaccaaggacgagcgcacccaggagctcatcgcgatctggaccaaggcgaccaacgag
gtcgccgaggcgatgaacgcgaacttcccgaagaccaaccccatcttcatgatggtcaac
tcgggtgctcgtggaaacatgatgcagatgcgtcagatcgccggtatgcgcggtctggtg
tcgaacgccaagaacgagaccatcccgcgtccgatcaaggcgtccttccgcgagggcctg
tccgtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgcc
ctgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtc
atcatccgcgaggaggactgcggcaccgaacgcggcctcaagctgcggatcgccgagcgc
ggcgccgacggcgtgctgcgcaaggcggaggacgtcgagacctccgtgtacgcgcggatg
ctcgccgaggacgtcgtcgtcgacggcaaggtcatcgcgccggccaacgtcgacctcggt
gacgtgctcatcgacgccgtggtcgccgcgggcgtcgaggaggtcaagacccgctcggtc
ctgacctgcgagtcggccgtcggcacctgtgccttctgctacggccgttcgctggccacc
ggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgag
cccggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatc
acccagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgcc
ccgatctccgaggccgccggccgcgtgcggatcgaggagaccgagaagaccaagaagatc
gtcgtcaccccggacgacggcagcgacgagacggcctacccgatctcgaagcgcgccaag
ctcaaggtccgcgagggcgaccacgtccaggtcggcgagccgctggccttcggtgcgacc
aacccgcacgacgtgctgcgcatcctcgggcagcgcgcggtccaggtccacctggtcggc
gaggtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatc
atcatccggcagatgctgcgccgggtgacgatcatcgagtccggcgacgcggagctgctg
ccgggcgagctggtcgagcgttcgcgcttcgagaccgagaaccgtcgtgtggtcaccgag
ggcggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctggcg
accgagtcgtggctgtccgcggcgtccttccaggagacgaccagggtcctgaccgacgcg
gcgatcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatcatcggtaag
ctcatcccggccggtacgggcctgtcccgctaccgcaacatccgggtcgagccgaccgag
gaggccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttc
ggcaccggctccggccaggccgtcccgctggaggactacgactacggtccgtacaaccag
taa
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integrated database retrieval system
