Streptomyces genisteinicus: IAG43_18880
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Entry
IAG43_18880 CDS
T07903
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sgj
Streptomyces genisteinicus
Pathway
sgj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAG43_18880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgj03021
]
IAG43_18880
03400 DNA repair and recombination proteins [BR:
sgj03400
]
IAG43_18880
Enzymes [BR:
sgj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAG43_18880
Transcription machinery [BR:
sgj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAG43_18880
DNA repair and recombination proteins [BR:
sgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAG43_18880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QNP64776
UniProt:
A0A7H0HW60
LinkDB
All DBs
Position
4318313..4319335
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgctgaccgaagaggtcgtcgacgagtaccgttcgcgg
ttcgtcatcgagcccctggagccgggcttcggctacacgctcggcaactccctgcgccgt
accctcctctcctcgatcccgggtgcggccgtcacgtccatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtcaccgccgcggacatcgccccgccggccggtgtcgaggtccacaac
cccgacctggtcctcgccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cgcatcccggtcgactccatctactcgccggtcctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcggaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggc
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctcgccgccgacctggcgctgccgatcgaggagctcgagctcaccgtccggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcgcgttccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctgaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgcgggcttcgtcgagaccgagcagtac
tga
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