Streptomyces genisteinicus: IAG43_28710
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Entry
IAG43_28710 CDS
T07903
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sgj
Streptomyces genisteinicus
Pathway
sgj00040
Pentose and glucuronate interconversions
sgj01100
Metabolic pathways
sgj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IAG43_28710
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IAG43_28710
Enzymes [BR:
sgj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IAG43_28710
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QNP66518
UniProt:
A0A7H0I152
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All DBs
Position
complement(6675435..6676739)
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AA seq
434 aa
AA seq
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MHLTRPQGRAVTALVGSTALVLAVTGTVQAHPHHAPKDPARQTLPAGDGWASQGAGTTGG
SKADAEHVYTVTTWDEFRAALAADPGAPRIIRVKGTVDATANGCAAFEAPGYDFDRYLAD
YDPAVWGLDTVVSGPQEDLRAQSAATQAAAISAFIPSDTTIVGVGRGAGITGASLQIKNV
SNVIIRNLTLESPLDCFPQWDPTDGETGAWNSEYDGMVVYGSTNVWVDHNTFTDGRYPDS
SLPEYYGEIYQQHDGQLDIVRGADLVTASWNVFTEHDKTLMIGNSDSAGATDRGKLRVTL
HHNLFDKVVERAPRVRFGQVDTYNNHYVVDEGPYVYSLGIGAESQLVAEHNSFSLAKSVS
PALILKKWKDSPVTTANNYVNGRKVDLLAVHNAEIPEEALRPDAGWTPVLRPRVDHPKVL
PLLVRLYAGAGRLR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcactagaccccagggccgcgccgtcacggcgctcgtcggttccaccgccctc
gttctcgcggtcaccggcacggtccaggcccacccgcaccacgcgccgaaggacccggca
cgccagaccctccccgccggcgacggctgggcctcccagggcgccggcaccaccggcggt
tcgaaggccgacgccgagcacgtgtacaccgtcaccacctgggacgagttccgggcggcg
ctcgccgccgaccccggggcaccgcggatcatccgcgtcaagggcaccgtcgacgccacc
gcgaacggctgcgccgccttcgaggcgccgggctacgacttcgaccggtacctcgccgac
tacgacccggccgtgtgggggctcgacaccgtcgtcagcggcccgcaggaggacctgcgc
gcccagtcggcggccacccaggccgcggcgatctccgcgttcatcccgtcggacaccacg
atcgtgggtgtcggccggggcgcgggcatcaccggcgcgagtctccagatcaagaacgtc
agcaacgtcatcatccgcaacctgaccctggagagcccgctcgactgcttcccgcagtgg
gaccccacggacggcgagacgggtgcctggaactccgagtacgacggcatggtcgtctac
ggctccacgaacgtctgggtcgaccacaacacgttcaccgacggccgctaccccgacagc
tcgctgcccgagtactacggcgagatctaccagcagcacgacggacagctcgacatcgtg
cggggcgccgacctcgtcacggcgtcgtggaacgtcttcaccgagcacgacaagacgctg
atgatcggcaacagcgacagcgccggcgcgaccgaccgcggcaagctgcgggtcaccctg
caccacaacctgttcgacaaggtcgtggagcgcgcgccccgcgtccgcttcggccaggtg
gacacctacaacaaccactacgtggtcgacgagggtccctacgtctacagcctcggcatc
ggcgcggagtcccagctggtggcggagcacaactccttctcgctcgcgaagtcggtgagc
ccggcgctgatcctgaagaagtggaaggactcgccggtcaccaccgcgaacaactacgtc
aacggacggaaggtcgacctgctggccgtccacaacgccgagatccccgaggaggccctg
cgtccggacgcgggctggacaccggtcctgcgcccccgcgtcgaccaccccaaggtcctg
ccgctgctggtcaggctgtacgcgggcgccggccggctgcgctga
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