Streptomyces genisteinicus: IAG43_29795
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Entry
IAG43_29795 CDS
T07903
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sgj
Streptomyces genisteinicus
Pathway
sgj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IAG43_29795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgj03400
]
IAG43_29795
Enzymes [BR:
sgj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IAG43_29795
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IAG43_29795
DNA repair and recombination proteins [BR:
sgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IAG43_29795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_8
DUF294_C
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QNP66701
UniProt:
A0A7H0I1N5
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All DBs
Position
6957101..6957961
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AA seq
286 aa
AA seq
DB search
MPELPEVEALRAFLDERLTGREIARVTPVAISVLKTYDPPPTALEGAEVTGVRRHGKWLD
IEAGGLRLIVHLARAGWLRWTDDMPAAPPRPGKGPLALRVALTDGAGFDLTEAGTTKRLA
VHLVRDPSDVPRIASLGPDPLDEGFDRAAFAAVLEGERRQVKGALRDQGLIAGIGNAYSD
EILHAARMSPFKPVQNLDEHDVDVLWEALRTTLRDAVERSRGLAAGRLKSEKKSGLRVHG
RTGLPCPVCGDTVREVSFSDSSLQYCPTCQTGGRPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgcccgaggtggaagcactgcgcgcgttcctcgacgagcggctcaccggc
cgggagatcgcccgggtgacgcccgtggccatcagtgtgctcaagacctacgaccctccg
cccaccgcgctggagggagccgaggtcaccggcgtccggcggcacggcaagtggctcgac
atcgaggccggcgggctccggctcatcgtccacctcgcccgcgccggctggctccggtgg
acggacgacatgcccgcggcgccaccgcgccccggaaaggggccgctcgccctgcgggtc
gccctcaccgacggcgccggcttcgacctcaccgaggcgggcaccaccaaacgcctcgcc
gtccacctcgtccgggacccctccgacgtgccccggatcgcctcgctgggccccgacccg
ctcgacgagggcttcgaccgggccgcgttcgccgccgtcctggaaggcgaacggcggcag
gtcaagggcgccctgcgcgatcaggggctgatcgccggcatcggcaacgcctacagcgac
gagatcctgcacgccgcccggatgtcccccttcaaaccggtccagaacctcgacgagcac
gatgtggacgtcctctgggaggcgctgcgcaccacgctgcgggacgccgtcgaacgctcc
cgcggactggccgcggggcgcctcaagtcggagaagaagagcgggctcagggtgcacggc
cggaccggcctgccctgccccgtgtgcggcgacaccgtgcgcgaggtgtccttcagcgac
tcctccctccagtactgcccgacctgccagaccggcggccggccgctggcggaccgcaga
ctctcgcggctgctgaagtga
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