Streptomyces goshikiensis: PET44_02485
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Entry
PET44_02485 CDS
T09307
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgk03016
]
PET44_02485 (thpR)
Enzymes [BR:
sgk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PET44_02485 (thpR)
Transfer RNA biogenesis [BR:
sgk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PET44_02485 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WBY18576
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All DBs
Position
487978..488562
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AA seq
194 aa
AA seq
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MKEQIQPSTVRVFIALAPPDDAKEELARALGPAYDAYPRMRWNRIEDWHITLAFLGELPV
GAVALLRPPLADLAATRRPVHLAMHGGGHFDERVLWSGIEGDLEDLHLLATDVRRVVREC
GVEFEERPLRPHLTLARSRRDDPTSVTEAAAGLAGFTGRRWEARRLHLVGSNTGRGPGPI
HYRDIEAWRFGGGS
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaacagattcagccctcgaccgtccgcgtgttcatagcgctggctccgcccgac
gacgcgaaggaagagctggcgcgggcgctcgggcccgcctacgacgcgtacccgcgcatg
cggtggaaccgcatcgaggactggcacatcaccctcgcgttcctcggcgagctcccggtc
ggggccgttgcgctcctgcggccgccgctggcggatctggcggcgacgcgtcggcccgta
cacctggcgatgcacggcggcgggcacttcgacgagcgggtgctgtggagcgggatcgag
ggggaccttgaggatctgcaccttctcgccaccgatgtccgccgcgtggtcagggagtgc
ggggtggagttcgaggagcggcccctgcgcccccacctcacgctggcccggtcccggcgc
gacgaccccaccagcgtgaccgaggccgccgccgggctcgccgggttcaccggccggcgg
tgggaggcgcggcggctgcacctggtgggcagcaacacgggccgggggccggggccgatc
cactaccgcgacatcgaggcgtggcgcttcggcggcggcagctga
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