Streptomyces goshikiensis: PET44_05140
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Entry
PET44_05140 CDS
T09307
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sgk
Streptomyces goshikiensis
Pathway
sgk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PET44_05140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgk03400
]
PET44_05140
Enzymes [BR:
sgk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PET44_05140
DNA repair and recombination proteins [BR:
sgk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PET44_05140
Prokaryotic type
PET44_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WBY19063
LinkDB
All DBs
Position
1268272..1268958
Genome browser
AA seq
228 aa
AA seq
DB search
MAARPLNEIVEPGWARALEPVAGQIAAMGDFLRAEIAAGRTYVPAGANVLRAFQQPFDEV
RVLIVGQDPYPTPGHAMGLSFSVAPEVSPWPPSLDNIFRELHADLGTGRPANGDLTPWTR
QGVLLLNRSLTTAPRKPNAHRGKGWEAVTEQAIRALAARGKPLVSVLWGREARNLRPLLG
ELPAVESVHPSPMSADNGFFGSRPFSKANELLVRQGAQPVDWRLPNTL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgaccgttgaacgagatcgtcgagccgggctgggcccgtgctcttgagccg
gtggcggggcagatcgccgccatgggcgacttcctgcgcgccgagatcgcggcggggaga
acctacgtaccggccggggcgaacgtcctgcgcgccttccagcagcccttcgacgaggtg
cgggtgctgatcgtcgggcaggacccgtaccccaccccggggcacgcgatgggcctgtcc
ttctcggtggcgcccgaggtcagtccgtggccgccgagcctggacaacatcttccgcgag
ctgcacgccgatctcggcacgggccgcccggcgaacggcgacctgaccccgtggacccgg
cagggcgtgctcctgctgaaccgctcgctcaccacggccccgcgcaagcccaacgcccat
cgcggcaagggctgggaggccgtcaccgagcaggcgatccgggcgctggccgcgcgcggg
aaaccgctggtgtcggtgctgtggggccgggaggcccgcaatcttcggccattgctgggc
gagttgcccgcggtggagtccgtccacccctcccccatgtccgcggacaacggtttcttc
gggtcgcggcccttcagcaaggccaatgaactgctggtacgtcagggagcgcagccggtc
gactggcgtctgccgaacaccctctga
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integrated database retrieval system
