Streptomyces goshikiensis: PET44_08150
Help
Entry
PET44_08150 CDS
T09307
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgk
Streptomyces goshikiensis
Pathway
sgk03030
DNA replication
sgk03430
Mismatch repair
sgk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PET44_08150
03430 Mismatch repair
PET44_08150
03440 Homologous recombination
PET44_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgk03032
]
PET44_08150
03400 DNA repair and recombination proteins [BR:
sgk03400
]
PET44_08150
Enzymes [BR:
sgk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PET44_08150
DNA replication proteins [BR:
sgk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PET44_08150
DNA repair and recombination proteins [BR:
sgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PET44_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WBY19598
LinkDB
All DBs
Position
1929542..1930519
Genome browser
AA seq
325 aa
AA seq
DB search
MTMLDDRTTAETTWPTAYPEGYAVVDVETTGLAREDRIVSAAVYRLDAQGNVEDHWYTLV
NPQRDPGPVWIHGLTSDMLQDAPLFKDIAGEFAGRLADRVLVAHNAIFDWQMIAREYARA
EETAPVRQRLCTIALSKELNLPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSL
HAAARDGVRLPLLECRPLTEWSDSAVTPRIGYQSSYRGGGWRPSRKRPACPHPNPGRFED
GKPLKQGMRIAFSGDTSVERELLEDRAVEAGLHIATSVSRLTSLLVTNDPDSATSKTVKA
KSFGTPVVDEAAFTQLLRDVAAADG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgctcgacgaccgtacgaccgcagagacgacctggccgaccgcgtaccccgag
gggtacgcggtcgtcgacgtggagaccaccgggctcgcgcgcgaggaccggatagtctcc
gcggccgtctaccggctcgacgcgcagggcaacgtggaggaccactggtacaccctggtc
aacccgcagcgcgatcccggcccggtgtggatccacgggctcaccagcgacatgctccag
gacgcgccgctcttcaaggacatcgccggggagttcgcgggccggctcgccgaccgggtc
ctcgtcgcgcacaacgccatcttcgactggcagatgatcgcccgggagtacgcccgggcc
gaggagaccgcgccggtccgtcagcggctgtgcaccatcgccctgtcgaaggagctgaac
ctcccgctgcccaaccacaagctggagtcgctcgccgcccacttcggcgtggtccagcag
cgcgcccaccacgcgctcgacgacgcccgggtactggcggaggcgttccgtccgtcgctg
cacgccgccgcgcgggacggcgtacggctgcccctgctggagtgccgcccgctgacggag
tggtcggactccgcggtcaccccccgcatcgggtaccagagctcgtaccggggcggcggc
tggcggccctcgcgcaagcggccggcgtgcccgcacccgaacccggggcgcttcgaggac
ggcaagccgctgaagcagggcatgcggatcgccttctcgggtgacacctcggtggagcgg
gaactcctggaggaccgcgcggtcgaggccgggctgcacatcgcgacgagcgtgtcgcgg
ctcaccagcctgctggtgacgaacgaccccgactcggcgacgtcgaagacggtcaaggcg
aagtccttcggaacgcccgtcgtcgacgaggcggccttcacccagctgctgcgggacgtg
gctgcggcagacgggtga
DBGET
integrated database retrieval system
