KEGG   Streptomyces goshikiensis: PET44_08580
Entry
PET44_08580       CDS       T09307                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
sgk  Streptomyces goshikiensis
Pathway
sgk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sgk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PET44_08580 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgk03400]
    PET44_08580 (uvrA)
DNA repair and recombination proteins [BR:sgk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PET44_08580 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PET44_08580 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_21 AAA_16 AAA_33 nSTAND1 AAA_25 AAA_23 AAA_22 DnaJ_CXXCXGXG NACHT Viral_helicase1 cobW ExoX-like_C DUF3667
Other DBs
NCBI-ProteinID: WBY19671
LinkDB
Position
complement(2020108..2023092)
AA seq 994 aa
MTDRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECRRPISRQSPQAIVDKVLALPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGETIQLSEPPTLKKQEKHTIEVVIDRLTVKDSAKRRLTDSVETALGLSGGMVILDFVDL
AEDDPERERMFSEHLYCPYDDLSFEELEPRSFSFNSPFGACPECTGIGTRMEVDPELIVP
DEDKSLDEGAVSPWSLGHTKDYFQRLIGALAGELGFRTDIPWAGLPLRARKALLYGHKTQ
IEVRYRNRYGRERAYTTAFEGAVPFVKRRHSESESDASRERFEGYMREVPCPTCEGTRLK
PIVLAVTVMERSIAEVAAMSISECADFLGRLKLDARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGKVVHSGSLKELLKNPESMTGQYLSGK
RSIAIPDVRRPVNGERKLTVHGARENNLQDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRRLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGDRYNRETL
EVHYKGKSIAEVLNMPIEEALDFFEAVPTIARHLRTLNEVGLGYVRLGQSAPTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLIKVLSGLVDKGNSVIVIEHNLDVIK
TADWVIDMGPEGGYGGGLVVAEGTPEQVASVGTSHTGKFLRDILGADRVLDAAPVPAARK
KAVAKKTAAPAKKAAAAKKTATVKKTTTARARKS
NT seq 2985 nt   +upstreamnt  +downstreamnt
gtgaccgaccgtctcatcgttcgtggcgctcgcgagcacaacctcaagaacgtctcgctc
gacctgccccgcgactcgctcatcgtcttcaccggactctccgggtcgggcaagtcctcc
ctggccttcgacacgatcttcgccgagggccagcgtcgctacgtcgagtcgctctcgtcg
tacgcccgccagttcctcgggcagatggacaagcccgacgtcgacttcatcgaggggctc
tcgccggccgtctcgatcgaccagaagtcgacctcgcgcaacccgcgctccaccgtgggc
accatcaccgaggtctacgactacctccgcctgctcttcgcccgcatcggcaagccgcac
tgccccgagtgccgccgcccgatctcgcggcagtcgccgcaggcgatcgtcgacaaggtg
ctcgcgctgcccgagggcagccgcttccaggtgctctcgccgctggtgcgcgagcgcaag
ggcgagttcgtggacctcttcgccgacctccagaccaagggctacagccgggcacgggtg
gacggggagaccatccagctctccgagccgcccacgctgaagaagcaggagaagcacacc
atcgaggtggtcatcgaccgcctcaccgtcaaggacagcgccaagcgccgcctcaccgac
tcggtggagaccgcgctcgggctctccggcggcatggtcatcctggacttcgtcgacctc
gccgaggacgaccccgagcgcgagcggatgttctccgagcacctctactgcccgtacgac
gacctgtccttcgaggagctggagccgcgctccttctccttcaactcgcccttcggcgcc
tgccccgagtgcaccggcatcggcacgcgcatggaggtggacccggagctgatcgttccg
gacgaggacaagtccctggacgagggggcggtctcgccgtggtccctcggccacaccaag
gactacttccagcggctgatcggcgcgctcgccggagagctgggcttccgtacggacatc
ccctgggcggggctgccgctgcgcgcgcgcaaggccctgctgtacgggcacaagacgcag
atcgaggtccgctaccgcaaccggtacgggcgggagcgggcgtacacgacggccttcgag
ggcgccgtgccgttcgtcaagcggcggcactcggagtcggagagcgacgcgagccgcgag
cgcttcgagggctacatgcgcgaggtgccctgcccgacctgtgagggcacccggctcaag
ccgatcgtgctcgcagtcacggtgatggagcggtccatcgccgaggtcgccgcgatgtcg
atcagcgagtgcgcggacttcctggggcggctcaagctcgacgcccgcgacaagaagatt
gccgagcgggtcctgaaggaggtcaacgagcggctccgcttcctcgtggacgtcggtctg
gactacctctcgctgaaccgagccgccggcaccctgtcgggcggcgaggcgcagcgcatc
cggctggccacgcagatcggctccggcctggtcggtgtgctgtacgtactggacgagcca
tccatcggcctgcaccagcgcgacaaccaccggctgatcgagacgctggtgcggctgcgg
gacatgggcaacaccctgatcgtcgtcgagcacgacgaggacaccatcaaggtggccgac
tgggtcgtggacatcggccccggtgccggtgagcacggcggcaaggtggtgcacagcggt
tcgctgaaggagctgctgaagaaccccgagtcgatgacgggccagtacctgtcgggcaag
cgctcgatcgcgatcccggatgtccggcggccggtgaacggggagcggaagctgaccgtc
catggtgcccgggagaacaacctccaggacatcgacgtgtcgttccccctgggcgtgctc
acggcggtcacgggtgtctctgggtccggcaagtcgaccctggtcaatgacatcctgtac
acccacctggcgcgcgagctgaacggcgcccggtcggtgccggggcggcacacgcgggtg
gacggcgacgacctggtcgacaaggtcgtccatgtcgaccagtcgcccatcgggcggacg
ccgaggtccaacccggccacgtacacgggcgtcttcgaccacgtgcgcaggctgttcgcc
gagacgatggaggcgaaggtgcgcggctacctgccgggccgcttctccttcaacgtgaag
ggcggccggtgcgagaactgctccggcgacggcacgatcaagatcgagatgaacttcctg
ccggatgtgtacgtcccgtgcgaggtgtgccacggcgaccggtacaaccgggagacgctg
gaggtccactacaagggcaagtccatcgcggaagtcctgaacatgccgatcgaggaggcg
ctggacttcttcgaggcggtgccgacgatcgcgcggcacctgcggacgctgaacgaggtc
gggctggggtacgtgcggctcgggcagtcggcgccgacgctgtcgggtggtgaggcgcag
cgcgtgaagctggcgtcggagctgcagaagcggtcgacggggcggacggtgtacgtgctg
gacgagccgacgacgggtctgcacttcgaggacatctcgaagctgatcaaggtgctgtcg
gggctggtggacaaggggaactcggtgatcgtcatcgagcacaacctggatgtcatcaag
accgcggactgggtcatcgacatgggcccggagggcggttacgggggcggcctcgtcgtc
gccgagggcacgccggagcaggtcgcgtcggtgggtacgagccacaccggcaagttcctg
cgggacatcctgggggcggaccgggtgctggacgcggcgccggtgccggcggcgcggaag
aaggccgtcgcgaagaagaccgcggcgccggcgaagaaggcggccgcggcgaagaagacg
gcgacggtgaagaagacgacgacggcgcgggcccgcaagtcctga

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