Streptomyces goshikiensis: PET44_12370
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Entry
PET44_12370 CDS
T09307
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgk03400
]
PET44_12370
DNA repair and recombination proteins [BR:
sgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PET44_12370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
WBY20354
LinkDB
All DBs
Position
complement(2881498..2881923)
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AA seq
141 aa
AA seq
DB search
MEAFESTPAVRARMSRQKSKDTKIEVALRRALHAAGLRYRVHRRPLKGIRREADIVFGPA
RVAVFVDGCFWHGCPEHATWPRRNAEFWRGKIEGNQARDRDTDARLAESGWLAVRVWEHE
AVDEAAERVRRIVLARRTPAS
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
gtggaagccttcgaaagcactcctgccgtccgcgctcgcatgagtcggcagaagagcaag
gacaccaagatcgaagttgccttgcgacgtgcgctgcacgcggcgggcttgcgctatcgg
gtgcaccgccgccccctgaagggcatacggcgcgaggccgacatcgtcttcggtccggcg
cgcgtcgccgtcttcgtggacggttgcttctggcacggatgccccgagcacgcgacatgg
ccccgccgcaacgcggagttctggcgcgggaagatcgagggaaaccaggcccgcgaccgt
gacaccgacgcgcgcctcgcggaatcgggctggctggccgtccgcgtctgggaacacgag
gccgtggacgaagccgcggagcgcgtacgccggatcgtgctggcgcgtcgaactccggct
tcctag
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