KEGG   Streptomyces goshikiensis: PET44_15920
Entry
PET44_15920       CDS       T09307                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
sgk  Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:sgk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgk03021]
    PET44_15920
Transcription machinery [BR:sgk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PET44_15920
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 MarR_2 GerE HTH_Crp_2 NirdL-like_HTH MarR HTH_3 DUF134 HTH_Tnp_4 DUF4423 DUF7343 HTH_37 NMB0315_dom_I
Other DBs
NCBI-ProteinID: WBY20971
LinkDB
Position
3650540..3651448
AA seq 302 aa
MPPQQDDARDARDARDSPHDSQVPPQQDAPQDPPAEPPQQPPPAPRPQSRGADTRALTQV
LFGQLKGLQPGTSEHTRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAID
RFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNAATEDLTTLHGRT
PTTPEIAERLRITEEEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPELAGVEH
RDLVRHLLVQLPEREQRILLLRYYNNLTQSQISAELGVSQMHVSRLLARSFARLRSANRI
EA
NT seq 909 nt   +upstreamnt  +downstreamnt
gtgccaccccagcaggacgacgcccgggatgccagggatgcccgggactccccgcacgac
tcccaggtcccgccccagcaggacgccccgcaggaccctccggcggagcccccgcagcag
cccccgcccgcccccagaccgcagagccggggcgcggacacccgggccctcacccaggtg
ctgttcggccagctgaagggcctccagcccggcaccagcgagcacacccgggtgcgcggc
gccctgatcgaggccaacctcccgctcgtccggtacgcggccgcccgcttccgcagccgc
aacgagccgatggaggacgtggtccaggtcggcaccatcggcctgatcaacgcgatcgac
cgcttcgacccggaccgcggggtgcagttcccgaccttcgccatgccgacggtcgtgggg
gagatcaagcggtacttccgcgacaacgtccgcaccgtccacgtaccgcgccggctccac
gagctgtgggtccaggtcaacgcggccaccgaggacctcaccaccctccacggccgcacc
ccgacgacgcccgagatcgccgagcggctgcggatcaccgaggaggaggtgctctcctgc
atcgaggccgggcggagctaccacgccacctcgctcgaagccgcccaggagggcgacggg
ctgcccgggctgctcgaccggctcggttacgaggacccggagctggccggggtcgagcac
cgcgacctggtccgccacctcctcgtacagctgcccgagcgcgaacagcggatcctgctc
ctgcggtactacaacaatctgacgcagtcacagatcagtgccgagctgggcgtctcccag
atgcacgtgtcccggctgctcgcccggagcttcgcccggctgcgatccgcaaacaggatc
gaggcgtaa

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