Streptomyces goshikiensis: PET44_15925
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Entry
PET44_15925 CDS
T09307
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgk03021
]
PET44_15925
Transcription machinery [BR:
sgk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PET44_15925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
WBY20972
LinkDB
All DBs
Position
3651669..3652508
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AA seq
279 aa
AA seq
DB search
MSVDQGSSKVLTLVKRELPAVSNRSEAIDTRTLSRSLFQRLAALDADSPERAYVRDTLIE
LNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKR
FFRDTSWSVRVPRRLQELRLALTKASDELAQKLDRSPTVPELAAVLGVSEEEVVDGLAVG
NAYTASSLDSPSPEDEGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERQIIMLR
FFANMTQSQIGEEVGISQMHVSRLLTRTLAQLRLGLIGE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaccagggcagctccaaggtgctcacgctcgtcaagcgtgagctgccggca
gtgtccaaccgctcggaagccatcgacacccgcaccctctcccgctccctcttccagcga
ctggccgccctggacgcggacagccccgaacgggcctacgtacgcgacaccctgatcgag
ctgaacctgccgctggtgcggtacgcggccgccaggttccgcagccgcaacgagccgatg
gaggacatcgtccaggtcggcacgatcggcctgatcaaggcgatcgaccggttcgactgc
gaacgcggcgtggagttcccgacgttcgcgatgccgaccgtcgtgggcgagatcaaacga
ttctttagggacacctcctggtcggtgcgcgtcccgcgccgcctccaggagctccgtctc
gccctcaccaaggccagtgacgagctcgcccagaagctcgaccgctcgccgaccgtgccg
gaactcgccgccgtgctcggggtgtcggaggaggaggtcgtcgacggcctcgccgtcggg
aacgcgtacacggcctcctcgctcgactcgccctcccccgaggacgagggcggcgagggc
tcgctcgcggaccgcctcggctacgaggacaccgcgctcgaaggcgtcgagtaccgcgag
tcgctgaagccgctgctggccaaactcccgccccgggaaaggcagatcatcatgctgcgg
ttcttcgccaacatgacgcagtcgcagatcggcgaggaggtcggcatctcccagatgcac
gtctcccggctgctcacccgcaccctcgcgcagctgcgcctgggcctgatcggcgagtag
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