Streptomyces goshikiensis: PET44_18885
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Entry
PET44_18885 CDS
T09307
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgk
Streptomyces goshikiensis
Pathway
sgk00061
Fatty acid biosynthesis
sgk00071
Fatty acid degradation
sgk01100
Metabolic pathways
sgk01212
Fatty acid metabolism
sgk02024
Quorum sensing
sgk04146
Peroxisome
Module
sgk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PET44_18885
00071 Fatty acid degradation
PET44_18885
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PET44_18885
09145 Cellular community - prokaryotes
02024 Quorum sensing
PET44_18885
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgk01004
]
PET44_18885
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgk04147
]
PET44_18885
Enzymes [BR:
sgk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PET44_18885
Lipid biosynthesis proteins [BR:
sgk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PET44_18885
Exosome [BR:
sgk04147
]
Exosomal proteins
Exosomal proteins of breast milk
PET44_18885
Exosomal proteins of breast cancer cells
PET44_18885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
WBY24175
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Position
4286949..4288805
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AA seq
618 aa
AA seq
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MTVGSGLPEPPFKTVVDGVVREVIVPPLAAPPGYGSLGDIPFDNALDAPAEAVLARKDRD
GTWRDVSAVEFAAQVLAVAKGLIAEGLREGDRLAIMARTTYEWTLLDFAGWAAGLVTVPV
YPTASALQARWIIQDSGAVACAVEDTEQARLISSERANLPGLAHLWEFDTGAIERLVKAG
ERIPGALVHARRAARTPDSVATLVYTSGTTGQPKGCVLTHANFFAEVDNAVGLLHPVFRS
VSKEPASTLLFLPMSHVFGRMVAVACLRARVRLGHAPSISTEDLLADLAGFRPTFLLAIP
YVLEKVYNTARATAEKMGRASSFDRAARIARRYGESAEGKRPGLGLRMARALYDPLVYRR
IRAALGGHVRYVLSGGSPLGRRLAAFYTGAGIEVFEGYGLTETTGASTVTPPLRPRLGTV
GWPLPGTAVRIADDGEVLLGGRHVFAGYWNVAAHDGGQWLATGDIGELDDDGYLTITGRK
KDLIITSGGKNVAPAPLEDWLRAHPLVGQCMVVGDNRPYVAALITLEPEGLAHWRQMHKK
QDVPGRELVRDEELRADVQRAVDEANRLVSRAESIRRFTVLPGQFTERRGHLTPSMKLRR
AAIARDYGREIDELYRRP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtggggtccgggctgcccgaaccgcccttcaagacggtcgtcgacggcgtcgtg
cgcgaggtgatcgtgccgccgctcgcggcgccgcccgggtacggctcgctcggggacatc
ccgttcgacaacgccctggacgcgccggccgaagccgtactggcgcgcaaggaccgggac
ggcacctggcgcgacgtgagcgccgtcgagttcgccgcgcaggtgctcgccgtcgccaag
ggactgatcgccgaggggctccgcgagggcgaccggctcgcgatcatggcgcggaccacc
tacgagtggacgctgctcgacttcgcgggatgggccgcggggctggtcaccgtacccgtc
taccccaccgcctccgccctccaggcgcgctggatcatccaggactccggagccgtcgcc
tgcgccgtcgaggacaccgaacaggcccggctcatcagctccgaacgggcgaacctgccc
ggcctcgcccacctgtgggagttcgacaccggagcgatcgagcggctggtcaaggccggg
gagcggatccccggcgccctcgtgcacgcccggcgggcggcgcgcaccccggactcggtg
gccaccctcgtctacacctcggggaccaccggacagcccaaggggtgcgtgctgacgcac
gccaacttcttcgccgaggtcgacaacgcggtcgggctgctgcacccggtgttcagatcg
gtgagcaaagaacccgcgtccaccctgctcttcctgccgatgtcgcacgtcttcgggcgg
atggtcgcggtggcctgcctgcgggcgcgggtgcggctggggcacgcgcccagcatcagc
accgaggacctgctggccgacctcgcgggattccggcccacgttcctgctggccatcccg
tacgtcctggagaaggtctacaacaccgcccgcgccaccgccgagaagatgggccgcgcc
tcctccttcgaccgggccgcgcggatcgcccgccgctacggggagagcgccgaaggcaag
cggcccggcctcggcctgcgcatggcgcgggcgctgtacgacccgctcgtctaccggcgg
atccgggcggccctcggcgggcacgtccggtacgtcctcagcggcggctccccgctgggg
cgccggctcgccgccttctacaccggcgcgggcatcgaggtcttcgaggggtacggactg
acggagaccacgggggcgtccaccgtcaccccgccgctgcggccgaggctgggaacggtg
gggtggccgctgccgggcaccgcggtccgcatcgccgacgacggcgaggtgctgctgggc
ggccggcacgtcttcgccgggtactggaacgtcgccgcgcacgacggcggccagtggctg
gccaccggtgacatcggcgaactcgacgacgacgggtacctgaccatcaccggccggaag
aaggacctgatcatcacctccggcggcaagaacgtcgccccggccccgctggaggactgg
ctgcgggcgcacccgctggtcgggcagtgcatggtggtcggagacaaccggccgtacgtc
gccgcgctgatcacgctggagccggaggggctggcgcactggcgccagatgcacaagaag
caggacgtccccgggcgggagctggtccgggacgaggaactgcgggccgatgtccagcgg
gccgtcgacgaggcgaaccggctggtctcgcgggcggagtcgatccggcgcttcacggtg
ctgcccgggcagttcacggagcggcgggggcacctgacgccctcgatgaaactgaggcgg
gccgcgatcgcccgcgactacgggcgggagatcgacgagctgtaccggcggccgtga
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