Streptomyces goshikiensis: PET44_21465
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Entry
PET44_21465 CDS
T09307
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgk
Streptomyces goshikiensis
Pathway
sgk03420
Nucleotide excision repair
sgk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PET44_21465
03430 Mismatch repair
PET44_21465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgk03400
]
PET44_21465
Enzymes [BR:
sgk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PET44_21465
DNA repair and recombination proteins [BR:
sgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PET44_21465
MMR (mismatch excision repair)
Other MMR factors
PET44_21465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
WBY24205
LinkDB
All DBs
Position
4825463..4827694
Genome browser
AA seq
743 aa
AA seq
DB search
MHRACGQISRPTHQTWQHGGVTAATHSSAFPAAADSADAVLLGLDPEQREVATTLRGPVC
VLAGAGTGKTRAITHRIAYGVRSGQLMPASVLAVTFTNRAAGEMRGRLRTLGAGGVQART
FHSAALRQLQYFWPKAVGGEVPRLVERKIQLVAEAGARCRIRLDRSELRDVTGEIEWAKV
TQTVPADYPAAALKAGRETPRDLAETAQIYGTYEQLKRDRGMIDFEDVLLLTVGILQDRR
DIAEQIRTQYQHFVVDEYQDVSPLQQRLLELWLGDRDSLCVVGDASQTIYSFTGATPDHL
LSFRTRYPQATVVKLIRDYRSTPQVVHLANGLLNQAKGRAAEHRLELVSQREPGPAPVYA
EYPDEPAEAEGVAGRIRDLIAAGVPAGEIAVLYRINAQSEVYEQALADAGVPYQLRGAER
FFERAEVQKGLLALRGAARSAGSGNDPLLDGVVELGSQVRAVLSSTGWSTEPPAGSGAVR
DQWESLAALVRLAEDFARARPGATLADLTIELEERKAAQHAPTVQGVTLASLHAAKGLEW
DAVFLVGLTDGMMPITYAKTDEQVEEERRLLYVGVTRARLHLTLSWGLSRAPGGRASRRP
SRFLNGLRPGSAAPGAREGAAAERGVRKRGRRGPVLCRVCGKTLTEAGELKLMRCEDCPS
DMDEGLYERLREWRATQSQEQGLPAYCVFTDKTLMAIAEAAPSEAGELSMISGVGGRKLD
RYGADVLAICAGGDPGGSGADDA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atccaccgtgcctgtggacagatttctcgcccgacccaccagacctggcagcatggcggg
gtgacagcagcaacgcactcctcagctttccccgccgccgcggactcggccgacgcggtg
ctcctgggcctggacccggagcagcgcgaggtcgcgacgaccctgcgcggaccggtgtgc
gtgctggccggtgccggtacgggcaagacccgcgcgatcacccaccgcatcgcctacggg
gtccgctccggccagctgatgcccgccagcgtgctggccgtcaccttcaccaaccgcgcc
gcgggcgagatgcgcggccgtctgcgcaccctcggagcgggcggggtccaggcccggacc
ttccactccgccgcgctgcgccagctccagtacttctggcccaaggccgtcggcggtgag
gtgccccgcctcgtcgagcgcaagatccagctcgtggccgaggccggcgcgcgctgccgc
atccgcctggaccggagcgagctgcgcgatgtcaccggtgagatcgagtgggccaaggtc
acccagaccgtccccgccgactacccggcggccgccctcaaggccggccgcgagaccccc
cgggacctggcggagaccgcccagatctacgggacgtacgagcagctcaagcgcgaccgc
ggcatgatcgacttcgaggacgtgctgctcctcaccgtcggcatcctccaggaccgccgc
gacatcgccgagcagatccgcacccagtaccagcacttcgtggtggatgagtaccaggac
gtcagcccgctccagcagcgcctgctggagctgtggctcggcgaccgcgacagcctctgc
gtcgtcggcgacgccagccagacgatctactccttcaccggcgcgacccccgatcacctg
ctgtccttccgcacccggtatccgcaggccaccgtggtcaagctgatccgcgactaccgc
tccaccccgcaggtggtccacctcgccaacgggctgctgaaccaggccaagggccgcgcc
gccgagcaccggctggagctggtctcgcagcgcgagcccggccccgccccggtctacgcc
gagtacccggacgagcccgccgaggccgagggcgtcgccggccggatccgggacctgatc
gccgccggcgtcccggccggcgagatcgccgtcctctaccgcatcaacgcccagtccgag
gtctacgagcaggccctcgccgacgccggggtgccctaccagctgcgcggggccgagcgg
ttcttcgagcgcgccgaggtccagaaggggctcctcgccctgcgcggggcggcccgctcc
gccggcagcggcaacgacccgctgctcgacggcgtcgtggaactcggctcccaggtccgg
gccgtgctcagctccaccggctggagcaccgaaccgccggccggctccggcgccgtgcgc
gaccagtgggaatccctggccgcgctcgtccggctcgccgaggacttcgcccgggcccgg
cccggcgccaccctggccgacctcacgatcgagctggaggagcgcaaggccgcccagcac
gcaccgaccgtccagggcgtcaccctcgcctcgctgcacgcggcgaagggcctggagtgg
gatgccgtgttcctcgtcggcctcaccgacggcatgatgccgatcacctacgcgaagacc
gatgagcaggtcgaggaggaacgccggctgctgtacgtcggcgtcacccgggcgcggctc
cacctgacgctctcgtggggcctctcgcgggctccgggcggccgggcctcccgacgcccc
agccgcttcctgaacggcctgaggccgggctccgcggccccgggcgcccgcgagggcgcg
gcggccgagcgcggcgtccgcaaacgcggccgccgagggccggtgctctgccgggtctgc
ggcaagacgctgaccgaggccggcgagctgaagctgatgcgctgcgaggactgtccgtcc
gacatggacgagggcctctacgagcggctgcgggagtggcgcgcgacacagtcgcaggag
caaggtctgcccgcgtactgcgtcttcacggacaagaccctgatggcgatcgcggaggcc
gcgccctccgaggcgggtgagctctcgatgatctcgggggtgggcggccgcaagctcgac
cggtacggggccgacgtcctggccatatgcgcaggtggggaccccgggggcagcggtgct
gacgacgcgtag
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