Streptomyces goshikiensis: PET44_23470
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Entry
PET44_23470 CDS
T09307
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sgk
Streptomyces goshikiensis
Pathway
sgk02024
Quorum sensing
sgk03060
Protein export
sgk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PET44_23470 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PET44_23470 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PET44_23470 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sgk02044
]
PET44_23470 (ffh)
Enzymes [BR:
sgk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PET44_23470 (ffh)
Secretion system [BR:
sgk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PET44_23470 (ffh)
Eukaryotic Sec-SRP protein
PET44_23470 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
cobW
nSTAND3
SRPRB
ArsA_ATPase
Zeta_toxin
MMR_HSR1
AAA_24
APS_kinase
AAA_18
TetR_C_7
AAA_26
AAA_33
MeaB
Motif
Other DBs
NCBI-ProteinID:
WBY22327
LinkDB
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Position
5275504..5277072
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AA seq
522 aa
AA seq
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MFDTLSDRLSATFKSLRGKGRLSEQDIDAAAREIRIALLEADVALPVVRSFIANVKERAR
GEEVSKALNPGQQVLKIVNDELVSILGGETRRLRFAKTAPTVIMLAGLQGAGKTTLAGKL
GLWLKGQGHAPLLVACDLQRPNAVNQLSVVAERAGVAVYAPAPGNGVGDPVQVAKDSIEY
ARTKQYDIVIVDTAGRLGIDQELMQQAADIRDAVSPDEILFVVDAMIGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSIAHVTGKQIMFASNGEKLDEFDAFHPDRMAGRILDMG
DMLTLIEQAEKTFSQAEAEKMAAKLAKGPKEFTLDDFLAQMEQVRKMGSISKLLGMLPGM
GQIKDQINNIDERDVDRMAAIIKSMTPAERQDPHLINGSRRARIAKGSGAEVSAVKSLVE
RFFEARKMMSRMAQGGGMPGMPGIPGMGGGPGRQKKQVKQAKGKRKSGNPMKRKEEEAAA
AARREQGPQAVEPAAGNPFGLPAGGQGGQDFDLPDEFKKFMK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgatacgctttccgaccgcctcagcgcgaccttcaagtccctccggggcaaaggt
cgcctctccgagcaggacatcgacgctgcggcgcgggaaatccgtatcgccctccttgag
gccgacgtcgccctcccggtcgtccgctccttcatcgcgaacgtcaaggagcgcgcccgc
ggcgaagaagtctccaaggccctgaacccgggccagcaggtcctcaagatcgtcaacgac
gagctcgtctcgatcctcggcggcgagacccgccgcctgcgcttcgcgaagaccgctccc
accgtgatcatgctcgcgggtctccagggtgccggtaagaccaccctcgccggcaagctc
ggcctgtggctgaagggacagggccacgccccgctcctcgtcgcctgcgacctccagcgc
cccaacgccgtgaaccagctcagcgtcgtcgccgagcgtgccggcgtggccgtctacgcg
cccgcccccggcaacggcgtcggtgacccggtccaggtcgccaaggactccatcgagtac
gcgcgcaccaagcagtacgacatcgtcatcgtcgacaccgccggccgcctcggcatcgac
caggagctgatgcagcaggccgcggacatccgcgacgccgtcagcccggacgagatcctc
ttcgtcgtcgacgccatgatcggccaggacgcggtcaacaccgccgaggccttccgcgac
ggcgtcggcttcgacggcgtcgtgctctccaagctcgacggcgacgcccggggcggtgcc
gcgctctccatcgcgcacgtcaccggcaagcagatcatgttcgcctcgaacggcgagaag
ctcgacgagttcgacgcgttccaccccgaccgcatggcgggccggatcctcgacatgggt
gacatgctcaccctcatcgagcaggccgagaagaccttcagccaggccgaagccgagaag
atggcggccaagctggcgaagggtcccaaggagttcacgctcgacgacttcctggcccag
atggagcaggtccgcaagatgggctccatctccaagctcctcggcatgctgccgggcatg
ggtcagatcaaggaccagatcaacaacatcgacgagcgcgacgtggaccgcatggcggcg
atcatcaagtcgatgaccccggccgagcgccaggacccgcacctcatcaacggctcgcgc
cgcgcccgtatcgccaagggttccggcgccgaggtcagcgccgtgaagtcgctggtcgag
cgcttcttcgaggcccgcaagatgatgtcccgcatggcccagggcggcgggatgcccggc
atgcccggcatcccgggcatgggtggcggccccggccggcagaagaagcaggtcaagcag
gccaagggcaagcgcaagagcggcaacccgatgaagcgcaaggaagaagaggccgctgcc
gccgcccggcgcgagcagggcccgcaggccgtggagcccgccgccggcaacccgttcggg
ctgcccgccggcggccagggcggccaggacttcgacctcccggacgagttcaagaagttc
atgaagtaa
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