Streptomyces goshikiensis: PET44_23885
Help
Entry
PET44_23885 CDS
T09307
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgk03016
]
PET44_23885 (truB)
Enzymes [BR:
sgk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PET44_23885 (truB)
Transfer RNA biogenesis [BR:
sgk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PET44_23885 (truB)
Prokaryotic type
PET44_23885 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
PUA
DKCLD
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WBY22402
LinkDB
All DBs
Position
5363702..5364637
Genome browser
AA seq
311 aa
AA seq
DB search
MSRQAGKKPGGTSGPEAAGGLVIVDKPSGFTSHDVVAKMRGIAKTRRVGHAGTLDPMATG
VLVLGVERATKLLGHLALTEKEYLGTIRLGQDTLTDDAEGEITSSTDASGVTREAVDKGI
AKLSGEIMQVPSKVSAIKIKGVRSYKRARDGEDFEIPARPVTISSFQVYDMRDAEAEDGT
KVVDLVVSVVCSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDRARTLDQLQEEL
TVMPIGEAAAAAFPRWDLDARRASLLANGVRIDMPDEYAEGRTVAVYGPEGQLLGLVESK
GGKAKSLAVFV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcaggcaggaaagaagccggggggcacctccgggccggaggccgcgggaggg
ctcgtcatcgtcgacaagccctccggcttcacttcgcacgacgtcgtggccaagatgcgc
gggatcgccaagacccgccgcgtcgggcacgccggcacgctcgacccgatggccacgggc
gtcctcgtgctcggcgtcgagagggcgaccaagctgctgggtcacctggcgctgacggag
aaggagtacctcgggacgatccgtctcgggcaggacaccctcaccgacgacgccgaaggc
gagatcacctcgtcgacggacgcctccggggtcacccgcgaggccgtcgacaagggcatc
gccaagctgtccggcgagatcatgcaggtcccgtccaaggtcagcgccatcaagatcaag
ggcgtgcgctcctacaagcgcgcccgtgacggcgaggacttcgagatcccggcccggccg
gtgaccatctcgtcgttccaggtgtacgacatgcgggacgcggaggccgaggacggcacc
aaggtcgtcgacctcgtcgtctccgtcgtctgctccagcggtacgtacatccgcgccctg
gcgcgcgacctcggcgccgacctcggcgtcggcggtcacctcaccgcgctgcggcgcacc
cgcgtcgggccgtacaagctcgaccgggcgcggaccctggaccagctccaggaggagctg
accgtcatgccgatcggcgaggcggcggccgcggcgttcccgcgctgggacctggacgcg
cggcgggcctcgctgctcgccaacggcgtacggatcgacatgccggacgagtacgcggaa
ggccgcaccgtcgctgtctacgggccggaggggcagctgctcgggctcgtggagagcaag
ggcggcaaggcgaagtcgctcgcggtcttcgtctga
DBGET
integrated database retrieval system
