Streptomyces goshikiensis: PET44_24030
Help
Entry
PET44_24030 CDS
T09307
Name
(GenBank) HAMP domain-containing protein
Organism
sgk
Streptomyces goshikiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
GLE1
Nup49_C
ATG14
Crescentin
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
WBY22426
LinkDB
All DBs
Position
5401058..5406592
Genome browser
AA seq
1844 aa
AA seq
DB search
MESGAAVRRTGTRPKGGRSRRSGTTEVDTAALDRLLAALVSMRDGNFRKRLTVSGDGVMA
EIAAVYNEVGDRNLHLTGELSRVRRMVGREGKLSERLETGACEGSWAAAIDASNQLVDDL
ARPVSEVGRVLSAVAEGDLDQRMDLRTQTADGAGHPLRGEFLKVGRTVNNLVDQLSAFTD
EVTRVALEVGTEGKLGGQAQVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTTAVAKGD
LSRKVTVHVAGEMLQLKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQAKVPGVAGVW
KDLTDSVNTMAGNLTAQVRGIAQVTTAVANGDLSQKVRVSARGEVAQLAETINQMTETLR
TFADEVTRVASEVGAKGTLGGQAQVPGAAGTWKDLTDSVNTVFRNLTTQVRDIATVTTAV
ANGDLSQKVTVDVAGEMLELKNTVNTMVDQLQSFGAEVTRVAREVGVEGELGGQAQVPGA
AGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKNTVNTMV
DQLSSFADQVTRMARDVGTEGRLGGQARVEGVSGTWKELTDSVNFMAGNLTSQVRQIAQV
TTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFAEQVTRVARDVGTEGRLGGQAQ
VPGVAGVWRDLTDSVNGMAGNLTSQVRNIAQVATAVARGDLSQKIDVDARGEILELKNTL
NTMVDQLSNFAEQVTRVAREVGTEGILGGQAEVKGVSGTWKDLTQSVNFMANNLTSQVRN
IAEVTTAVAMGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVGSEGILG
GQARVRGVTGIWKDLTDNVNLMANNLTSQVRNISQVSAAVANGDLTKKVTVEARGEVAQL
ADTVNTMVKTLSSFADEVTRVAREVGTEGRLGGQAHVPGVSGTWKDLTDSVNFMASNLTG
QVRQIAMVTTAIAKGDMTKKIDIDARGEILELKTTINTMVDQLSSFADQVTRVAREVGTE
GILGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLSLKVDVDAAGE
IQVLQDNINTMIVNLRDTTLANKEQDWLKGNLARISALMQGRRELDDVASLIMSELTPVV
SAQHGAFYLALPAGGSPEIGTDGGADGSYELRMRGSYAYAGTQMPTSFRPGEGLIGTVAE
EKRTILVENTPPGYLKISSGLGEAPPAHVIVLPVLFEGTVLGVIELASFTPFTQIQKDFL
SQIAEMIGTSVNTISVNSRTELLLKQSQEMTEQLRERSDELENRQKALQAANAELEEKAE
LLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAK
LLADNADENLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVD
YVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDTGAVELVI
RPAGTDVPPAIREQLLEAGSLREADGDLIAFSVTDTGIGIAASKMLVIFEAFKQADGTTS
RKYGGTGLGLSISREIARLLGGEIHAASEPGRGSTFTLYLPLHPSELPPQGYAPPTPGGG
RGELYRRPAEEARPVLPAAPAPPVSVPPAQAQPALPATPAHDPVGQGLGGAAALFRRRRK
SLGDAEARTAVPGQSMTHGPEDGWGGADEELPVPPRTYDFHGEKVLIVDDDVRNVFALTS
VLEQHGLAVLYAENGREGIEVLEQHDDVTVVLMDIMMPEMDGYATTSAIRRMPQFAGLPI
IALTAKAMKGDREKAIDSGASDYVTKPVEPDYLLSVMEQWMRGK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcggtgcggcgtacggggacgcggcccaagggcgggcgttcccgg
cggagcggcacgacggaagtcgatacggccgctctggaccggctgctcgcggccctggtg
tcgatgcgggacgggaacttccgcaagcggctgacggtgtccggcgacggcgtgatggcg
gagatcgcggccgtctacaacgaggtcggcgaccgcaatctccacttgaccggcgagctg
tcccgggtccggcggatggtgggccgcgagggcaagctgagcgagcggctggagacgggg
gcctgcgagggctcctgggcggccgcgatcgacgcctcgaaccagctggtggacgatctg
gcccggccggtgtccgaggtgggccgcgtcctgtcggcggtggccgagggcgatctggac
cagcggatggacctgcggacgcagacggccgacggggccgggcatccgctgcgcggggag
ttcctcaaggtcggccggacggtcaacaacctcgtcgaccagctctccgcgttcaccgac
gaggtgacgagggtcgcactggaggtcggtaccgagggcaagctcggcggtcaggcccag
gtgcgcggaatgtcgggctcctggaaggacctgaccgactccgtcaacaccatggcgtac
cgcctcaccgctcaggtgcgtgacatcgctctcgtcacgacggcggtcgcgaagggcgat
ctgtcgcgcaaggtcacggtgcacgtggccggcgagatgctccagctgaagaacaccgtg
aacacgatggtggaccagctgtcgtcgttctcctccgaggtgacgagggtcgcccgcgag
gtgggtacggagggcgagctcggcggccaggcgaaggtgcccggggtcgcgggcgtgtgg
aaggacctgaccgactccgtcaacaccatggcggggaacctcaccgcccaggtgcgcggg
atcgcccaggtgacgacggccgtcgccaacggcgacctgtcgcagaaggtgcgggtcagc
gcgcgcggcgaggtcgcgcaactggccgaaacgatcaatcagatgaccgagaccctgagg
accttcgcggacgaggtcacgcgcgtggccagcgaggtcggggccaagggaaccctcggg
ggccaggcgcaggtgccgggtgcggcggggacgtggaaggacctcaccgactcggtgaac
acggtcttccgcaacctcacgacacaggtgcgggacatcgcgaccgtgacgacggcggtg
gccaacggggacctctcgcagaaggtcaccgtcgatgtggccggcgagatgctggagctg
aagaacaccgtcaacacgatggtggaccagctccagtccttcggcgccgaggtgacgcgg
gtggcccgcgaggtcggcgtcgagggcgaactgggcggccaggcgcaggtgccgggcgcc
gccggtacctggaaggacctcaccgactcggtgaacaccgccttccgcaacctcaccggg
caggtccgcaacatcgcccaggtgacgacggcggtggccaacggcgacctgtcgcagaag
gtcaccgtggacgtctccggcgagatgctccagctcaagaacaccgtgaacacgatggtg
gaccagctgtcctcgttcgcggaccaggtcacgcggatggcccgggacgtgggtacggag
ggccggctcggcggccaggcacgggtggagggggtctcgggcacctggaaggagctcacc
gactccgtcaacttcatggccggcaacctgacctcccaggtgcgccagatcgcccaggtg
accacggcggtggcccgcggtgacctgtcccagaagatcgacgtggacgcgcgcggcgag
atcctggagctgaagaacaccatcaacacgatggtcgaccagctctccgccttcgccgag
caggtgacccgggtggcccgggacgtgggcacggagggccggctcggcggccaggctcag
gtccccggcgtggccggggtgtggcgcgacctgaccgactcggtgaacggcatggccggg
aacctgacctcgcaggtccgcaacatcgctcaggtcgcgaccgcggtggcccgcggcgac
ctgtcccagaagatcgacgtggacgcgcgcggcgagatcctggagctgaagaacaccctc
aacaccatggtcgaccagctctcgaacttcgcggagcaggtgacccgcgtcgcccgcgag
gtgggcaccgagggcatcctgggcggccaggcggaggtgaagggtgtctccggcacctgg
aaggacctcacccagtccgtcaacttcatggcgaacaacctgacctcgcaggtgcgcaac
atcgccgaggtgacgacggcggtcgcgatgggcgacctctcgaagaagatcaccgtcgat
gccaagggcgagatcctcgaactcgtcacgaccgtcaacacgatggtcgaccagctgtct
tcgttcgcggagcaggtgacgcgggtggcccgcgaggtgggttccgagggcatcctcggc
ggtcaggcgcgggtgcgcggggtgaccggcatctggaaggacctgaccgacaacgtcaac
ctgatggccaacaacctgacgtcgcaggtgcgcaacatctcgcaggtctcggcggcggtc
gccaacggcgacctgacgaagaaggtcacggtcgaggcgcgcggcgaggtcgcccagctc
gccgacaccgtcaacacgatggtcaagacgctgtcctcgttcgccgacgaggtgacccgg
gtggcccgcgaggtgggcacggagggccggctcggcggccaggcgcacgtgccgggtgtg
tcggggacgtggaaggacctcaccgattcggtgaacttcatggcctccaacctcaccggc
caggtgcggcagatcgccatggtcacgaccgccatcgccaagggcgacatgaccaagaag
atcgacatcgacgcccgcggcgagatcctggagctcaagaccaccatcaacacgatggtg
gaccagctgtcctcgttcgccgaccaggtgacccgcgtggcccgcgaggtgggtacggag
ggcatcctgggcggccaggcccgcgtccgtgacgtggacggcacctggcgggacctcacg
gagtccgtgaacgagatggccgggaacctcacccggcaggtgcgggccatcgcggccgtc
gccacggccgtgacccggggcgatctgagcctgaaggtcgacgtggacgccgcgggcgag
atccaggtcctccaggacaacatcaacacgatgatcgtcaacctgcgcgacaccaccttg
gccaacaaggagcaggactggctcaagggcaacctggcccggatctccgccctgatgcag
ggccgccgggagctggacgacgtggcctcgctgatcatgagcgagctgaccccggtggtc
tccgcgcagcacggcgccttctacctcgccctgcccgcgggcggcagccccgagatcggg
acggacggcggcgcggacggctcgtacgagctgcggatgcgcggcagttacgcgtacgcc
ggcacccagatgcccacgtcgttccggccgggggaggggctgatcgggacggtcgccgag
gagaagcggacgatcctcgtcgagaacaccccgcccggctacctgaagatctcctcgggg
ctgggcgaggccccgccggcgcacgtgatcgtgctgccggtgctgttcgagggcaccgtc
ctcggggtcatcgagctggcttcgttcacgccgttcacccagatccagaaggacttcctc
agtcagatcgccgagatgatcggtacgagcgtcaacaccatctccgtcaactccaggacg
gagctgctgctcaagcagtcgcaggagatgaccgagcagctgcgagagcgctccgacgag
ctggagaaccggcagaaggcgctccaggccgccaacgcggaactggaggagaaggccgag
ctgctggcccagcagaaccgggacatcgaggtgaagaacaccgagatcgaggaggcccgg
caggtcctggaggagcgcgccgagcagctcgcggtctcgatgcgctacaagtccgagttc
ctggcgaacatgtcgcacgagctgcgcacgccgctgaactcgctgctgatcctggccaag
ctgctcgccgacaacgccgacgagaacctgtcgccgaagcaggtggagttcgccgagacc
atccacggcgccggctcggacctgctccagctgatcaacgacatcctcgacctgtcgaag
gtcgaggccgggaagatggacgtctcgccgacccggatcgctctggtccagctcgtggac
tacgtggaggcgaccttccggccgctgaccgcggagaaggggctggacttctcggtacgg
gtctccccggagctcccggcgaccctgcacaccgacgagcagcggctgctccaggtgctg
cgcaacctgctgtcgaacgcggtgaagttcaccgacaccggtgcggtggagctggtgatc
cggcccgccggtacggacgtgccgccggcgatccgggagcagctgctggaggccggttcg
ctgcgcgaggcggacggggacctgatcgccttctcggtgaccgacaccggcatcgggatc
gcggcgagcaagatgctggtgatcttcgaggcgttcaagcaggccgacgggaccaccagc
cgcaagtacggcggtacgggcctcgggctgtcgatcagccgggagatcgcccgcctgctg
ggcggggagatccacgcggccagtgagccgggccgcgggtccaccttcacgctctacctc
ccgctgcacccgagcgagcttcctccgcaggggtacgcgccgccgacgcccggcggcggg
cgcggcgagctgtaccgcaggcccgccgaggaggcgcggcccgtgctgccggcggccccg
gcgccgccggtgtccgtaccgcccgcgcaggcccagccggcgctgcccgcgacgccggcc
cacgatccggtgggccaggggctgggcggggccgccgcgctgttccggcggcggcgcaag
tcgctgggggacgcggaggcgcggacggcggtgccggggcagtcgatgacgcacggcccc
gaggacggctggggcggggcggacgaggaactgccggtgccgccgcggacgtacgacttc
cacggcgagaaggtcctgatcgtggacgacgacgtgcgcaacgtcttcgcgctgaccagc
gtgctggagcagcacggactggcggtgctgtacgcggagaacggccgggagggcatcgaa
gtcctggagcagcacgacgatgtgacggtcgtgctgatggacatcatgatgccggagatg
gacgggtacgcgacgacctcggcgatccggcggatgccccagttcgcggggctgccgatc
atcgcgctgacggcgaaggcgatgaagggggaccgggagaaggccatcgattccggtgcc
tccgactacgtcaccaagccggtcgaacccgattatctgctgtcggtgatggagcagtgg
atgcgcggaaagtga
DBGET
integrated database retrieval system
