Streptomyces goshikiensis: PET44_24050
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Entry
PET44_24050 CDS
T09307
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgk03009
]
PET44_24050 (rimO)
Enzymes [BR:
sgk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PET44_24050 (rimO)
Ribosome biogenesis [BR:
sgk03009
]
Prokaryotic type
ribosomal protein modification factors
PET44_24050 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Mur_ligase_C
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
WBY22430
LinkDB
All DBs
Position
5411743..5413230
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AA seq
495 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGKTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAARQDAEVALPGHAQEPEAAPADLPEGLAPASGPRAPLR
RRLDKSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIMLVS
ENNTSYGKDLGDIRLLETLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYF
DLSFQHSAPDVLRAMRRFGDTDRFLELLDTIRGKAPQAGVRSNFIVGFPGEKESDFKELE
RFLTHARLDAIGVFGYSDEDGTEAVTYEGKLDEDTIAERLAHMQRLAEELTSQRAEERIG
ETLEVLVESVESVDEDSEGAYGRAAHQAPETDGQVVFTDSTGLVPGRIVTAKVVGTLGVD
LVAEPLGADLEEAAG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcggcggatggctgggagctcgtcgaggacgccgcc
gacgcggacgtagccgtcgtcaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtagacgccctgctggaagccaacgatctcaaggatcacggcaagacccaggccgtggtg
gccgtcggctgtatggccgagcgctacggcaaggaactcgccgaagcgctccccgaggcc
gacggcgtgctcggattcgacgactacgccgacatctccgaccgcctgcagaccatcctc
aacggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggccgcccgccaggacgccgaggtggccctgcccggccacgcgcaggagcccgaggcc
gcccccgccgacctccccgagggtctcgcgcccgcctccgggccgcgcgcgccgctgcgc
cgccgcctggacaagagcccggtcgcctcggtcaagctcgcctccggctgcgaccggcgc
tgctccttctgcgccatcccgtccttccgcggctcgttcatctcgcggcgccccagcgac
gtgctgggcgagacgcgctggctcgccgagcagggcgtcaaggagatcatgctggtctcc
gagaacaacacctcgtacggcaaggacctcggcgacatccgtctgctggagaccctgctg
cccgagctggccgaggtggacggcatcgagcgcgtccgcgtcagctacctccagccggcc
gagatgcggcccggcctgatcgacgtactcacctcgacccccaaggtcgtcccgtacttc
gacctgtccttccagcactccgcccccgacgtgctgcgcgccatgcgccgcttcggtgac
acggaccgcttcctggagctgctggacaccatccgcggcaaggccccgcaggccggcgtc
cggtccaacttcatcgtcggcttccccggcgagaaggagtcggacttcaaggagctggag
cgcttcctcacccacgcccgcctcgacgccatcggcgtcttcggctactcggacgaggac
ggcaccgaggccgtcacctacgagggcaagctggacgaggacaccatcgccgagcgcctg
gcgcacatgcagcggctcgccgaggagctcacctcgcagcgcgcggaggagcggatcggg
gagaccctggaggtcctcgtcgagtcggtggaatccgtggacgaggacagcgagggtgcc
tacgggcgcgccgcccaccaggctcccgagaccgacggccaggtcgtcttcaccgacagc
acgggcctggtccccgggcgtatcgtcacggcgaaggtggtcggcacgctgggtgtggac
ctggtggccgagcccctgggcgcggatcttgaggaggcggccggatga
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