KEGG   Streptomyces goshikiensis: PET44_24240
Entry
PET44_24240       CDS       T09307                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sgk  Streptomyces goshikiensis
Pathway
sgk00300  Lysine biosynthesis
sgk00470  D-Amino acid metabolism
sgk01100  Metabolic pathways
sgk01110  Biosynthesis of secondary metabolites
sgk01120  Microbial metabolism in diverse environments
sgk01230  Biosynthesis of amino acids
Module
sgk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sgk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PET44_24240 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PET44_24240 (dapF)
Enzymes [BR:sgk01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PET44_24240 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: WBY22465
LinkDB
Position
5450653..5451528
AA seq 291 aa
MTQTSLSFLKGHGTENDFVIVPDPDNAIELPATAVAKLCDRRAGIGGDGVLHVVRSAAHP
EAKAMAGEAEWFMDYRNSDGSIAEMCGNGVRVFARYLQYAGHVEPGDLAIATRGGVKRVH
LDKRGDVTVSMGRAEFPEGEVTVSVGDRSWPARNVNMGNPHAVAFVDSLDDAGTLYDAPP
FSPASAYPAGVNVEFVADRGPRHVAMRVHERGSGETRSCGTGACAVAVAAIRRDGVDPAE
TGEQVTYTVDLPGGTLVITEYPDGRIDMTGPAVIVGSGEFDAAWLAETAFV
NT seq 876 nt   +upstreamnt  +downstreamnt
gtgacgcagaccagcctctccttcctcaagggccacggcaccgagaacgacttcgtgatc
gtcccggacccggacaacgccatcgagctgcccgcgaccgccgtcgcgaagctgtgcgac
cggcgggccggcatcggcggcgacggcgtgctgcacgtcgtgcgctccgccgcgcacccc
gaggcgaaggccatggccggcgaggccgaatggttcatggactaccgcaacagcgacggc
tccatcgcagagatgtgcggcaacggcgtccgcgtcttcgcccgctacctccagtacgcc
gggcacgtcgagcccggtgacctcgccatcgccacccggggcggcgtcaagcgcgtccac
ctcgacaagcgcggcgacgtgacggtttccatgggccgcgccgagttccccgagggcgag
gtgaccgtctccgtcggcgaccggtcctggcccgcgcggaacgtcaacatggggaacccg
cacgcggtggcgttcgttgacagcctggacgatgccggaaccctgtacgacgcgcccccg
ttcagcccggcctccgcctacccggcaggtgtcaacgtcgagttcgtcgccgaccgaggc
ccgcggcacgtcgccatgcgcgtccacgagcgcggctccggcgagacccgctcctgcggc
accggcgcctgcgccgtcgccgtggccgccatccggcgcgacggcgttgaccccgccgag
accggcgaacaggtcacgtacacggtcgatctgcccggtggaaccctggtcatcacggag
taccccgacggccggatcgacatgaccggacccgccgtcatcgtcggctcgggcgagttc
gacgcggcctggctcgccgaaacggccttcgtctga

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